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The SPHN RDF Schema

Metadata

URI
https://biomedit.ch/rdf/sphn-ontology/sphn
Version URI
https://biomedit.ch/rdf/sphn-ontology/sphn/2023/2
Prior Version
https://biomedit.ch/rdf/sphn-ontology/sphn/2023/1
Imports
http://snomed.info/sct/900000000000207008/version/20221231
https://biomedit.ch/rdf/sphn-resource/atc/2023/1
https://biomedit.ch/rdf/sphn-resource/chop/2023/4
https://biomedit.ch/rdf/sphn-resource/geno/20220810
https://biomedit.ch/rdf/sphn-resource/hgnc/20221107
https://biomedit.ch/rdf/sphn-resource/icd-10-gm/2023/3
https://biomedit.ch/rdf/sphn-resource/loinc/2.74/1
https://biomedit.ch/rdf/sphn-resource/so/20211122
https://biomedit.ch/rdf/sphn-resource/ucum/2023/1
License
https://creativecommons.org/licenses/by/4.0/
SPHN RDF Schema
RDF (turtle)
External Terminologies in RDF
BioMedIT Portal (with Switch edu-ID)

Description

The RDF schema describing concepts defined in the official SPHN dataset

Table of Contents

  1. Classes
  2. Deprecated Classes
  3. Valuesets
  4. Object Properties
  5. Datatype Properties
  6. Annotation Properties
  7. Named Individuals
  8. Namespaces
  9. Legend

Classes

Access Device Presencec # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#AccessDevicePresence
Description

application of medical access device, such as cannula, tube, catheter or drainage

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 397578001 | Device in situ (finding) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has medical deviceop
1 .. 1 Yes
has insertion pointop
0 .. 1 Body Sitec
has administrative caseop
0 .. 1 Administrative Casec
has resting pointop
0 .. 1 Body Sitec
has end datetimedp
0 .. 1 xsd:dateTimec
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has start datetimedp
0 .. 1 xsd:dateTimec
has data provider instituteop
1 .. 1 Data Provider Institutec
Restrictions
has medical deviceop / has type codeop : descendants of the given classes are allowed

SNOMED 105789008 | Cannula/tube/catheter, device (physical object) |c

Administrative Casec # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#AdministrativeCase
Description

administrative artefact for billing according to Swiss DRG

Schema representation
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has discharge datetimedp
0 .. 1 xsd:dateTimec
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has discharge locationop
0 .. 1 Locationc
has data provider instituteop
1 .. 1 Data Provider Institutec
has admission datetimedp
1 .. 1 xsd:dateTimec
has care handlingop
0 .. 1 Care Handlingc
has origin locationop
0 .. 1 Locationc
has identifierdp
1 .. 1 xsd:stringc
Restrictions None
Used in
(In the range of)
has administrative caseop

Administrative Genderc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#AdministrativeGender
Description

the gender of the individual used for administrative purposes

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 365873007 | Gender finding (finding) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has record datetimedp
0 .. 1 xsd:dateTimec
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has codeop
1 .. 1 Yes
Restrictions
has codeop : descendants of the given classes are not allowed

SNOMED 446151000124109 | Identifies as male gender (finding) |c SNOMED 446141000124107 | Identifies as female gender (finding) |c SNOMED 74964007 | Other (qualifier value) |c

Adverse Eventc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#AdverseEvent
Description

results from an intervention that caused unintentional harm

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 281647001 | Adverse reaction (disorder) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has data provider instituteop
1 .. 1 Data Provider Institutec
has onset datetimedp
0 .. 1 xsd:dateTimec
has outcomeop
0 .. 1 Yes
has interventiondp
0 .. 1 xsd:stringc
has codeop
1 .. 1 Yes
has consequencesop
0 .. 1 Yes
has administrative caseop
0 .. 1 Administrative Casec
has severity codeop
0 .. 1 Codec or Terminologyc
Restrictions
has outcomeop :

Adverse Event outcomec

has codeop :

Codec

has consequencesop :

Adverse Event consequencesc

Notes

sphn:hasSeverityCode allowed coding system: CTCAE or other

sphn:hasCode allowed coding system: MedDRA

Agec # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#Age
Description

time elapsed since birth of the individual

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 397669002 | Age (qualifier value) |c
LOINC 30525-0 | Age |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has quantityop
1 .. 1 Yes
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has determination datetimedp
1 .. 1 xsd:dateTimec
Restrictions
has quantityop / has unitop / has codeop :

ucum:minc ucum:hc ucum:dc ucum:wkc ucum:moc ucum:ac

Used in
(In the range of)
has subject ageop

Allergenc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#Allergen
Description

any substance, product or physical force producing immediate hypersensitivity

Schema representation
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has codeop
1 .. * Yes
Restrictions
has codeop :

Codec SNOMED 138875005 | SNOMED CT Concept (SNOMED RT+CTV3) |c sphn-atc:ATCc

Notes

sphn:hasCode allowed coding system: SNOMED CT, ATC, GTIN

Used in
(In the range of)
has allergenop

Allergyc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#Allergy
Description

risk of harmful or undesirable, physiological response which is unique to an individual and associated with exposure to an allergen

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 418038007 | Propensity to adverse reactions to substance (finding) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has reaction type codeop
0 .. 1 Yes
has first record datetimedp
0 .. 1 xsd:dateTimec
has last reaction datetimedp
0 .. 1 xsd:dateTimec
has allergenop
0 .. 1 Allergenc
has verification status codeop
0 .. 1 Yes
has severity codeop
0 .. 1 Yes
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has data provider instituteop
1 .. 1 Data Provider Institutec
Restrictions
has reaction type codeop : descendants of the given classes are not allowed

SNOMED 419199007 | Allergy to substance (finding) |c SNOMED 782197009 | Intolerance to substance (finding) |c

has verification status codeop : descendants of the given classes are not allowed

SNOMED 410605003 | Confirmed present (qualifier value) |c SNOMED 415684004 | Suspected (qualifier value) |c SNOMED 723511001 | Refuted (qualifier value) |c SNOMED 723510000 | Entered in error (qualifier value) |c

has severity codeop : descendants of the given classes are not allowed

SNOMED 723505004 | Low risk (qualifier value) |c SNOMED 723509005 | High risk (qualifier value) |c SNOMED 723507007 | Unable to determine risk (qualifier value) |c

Allergy Episodec # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#AllergyEpisode
Description

manifestation of an allergic reaction following an exposure to an allergen

Schema representation
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has manifestation severity codeop
0 .. 1 Yes
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has exposure durationop
0 .. 1 Quantityc
has certainty codeop
0 .. 1 Yes
has data provider instituteop
1 .. 1 Data Provider Institutec
has manifestation body siteop
0 .. 1 Body Sitec
has exposure route codeop
0 .. 1 Yes
has manifestation durationop
0 .. 1 Quantityc
has exposure datetimedp
0 .. 1 xsd:dateTimec
has administrative caseop
0 .. 1 Administrative Casec
has allergenop
1 .. 1 Allergenc
has manifestation codeop
0 .. 1 Yes
has manifestation datetimedp
0 .. 1 xsd:dateTimec
Restrictions
has manifestation severity codeop : descendants of the given classes are not allowed

SNOMED 255604002 | Mild (qualifier value) |c SNOMED 6736007 | Moderate (severity modifier) (qualifier value) |c SNOMED 24484000 | Severe (severity modifier) (qualifier value) |c

has certainty codeop : descendants of the given classes are not allowed

SNOMED 415684004 | Suspected (qualifier value) |c SNOMED 410592001 | Probably present (qualifier value) |c SNOMED 410605003 | Confirmed present (qualifier value) |c

has exposure route codeop : descendants of the given classes are allowed

SNOMED 284009009 | Route of administration value (qualifier value) |c

has manifestation codeop : descendants of the given classes are allowed

SNOMED 404684003 | Clinical finding (finding) |c

Biobanksamplec # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#Biobanksample
Description

biosample stored in a biobank

Schema representation
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has sampleop
1 .. 1 Samplec
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has data provider instituteop
1 .. 1 Data Provider Institutec
has administrative caseop
0 .. 1 Administrative Casec
has identifierdp
1 .. 1 xsd:stringc
has biobank namedp
1 .. 1 xsd:stringc
Restrictions None

Birth Datec # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#BirthDate
Description

the date and time of birth of the individual

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 184099003 | Date of birth (observable entity) |c
LOINC 21112-8 | Birth date |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has monthdp
0 .. 1 xsd:gMonthc
has subject pseudo identifierop
1 .. * Subject Pseudo Identifierc
has comparatorop
0 .. 1 Yes
has timedp
0 .. 1 xsd:timec
has yeardp
1 .. 1 xsd:gYearc
has daydp
0 .. 1 xsd:gDayc
Restrictions
has comparatorop :

Comparatorc

Blood Pressurec # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#BloodPressure
Description

blood pressure measured either in the artery, in the vein, or in the pulmonary circulation

Schema representation
Parents
Measurementc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has systolic pressureop
0 .. 1 Yes
has measurement methodop
0 .. 1 Yes
has administrative caseop
0 .. 1 Administrative Casec
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has data provider instituteop
1 .. 1 Data Provider Institutec
has body siteop
0 .. 1 Yes
has mean pressureop
0 .. 1 Yes
has measurement datetimedp
1 .. 1 xsd:dateTimec
has diastolic pressureop
0 .. 1 Yes
Restrictions
has systolic pressureop / has unitop / has codeop :

ucum:mmsblHgsbrc

has measurement methodop / has codeop : descendants of the given classes are allowed

SNOMED 716777001 | Hemodynamic monitoring (regime/therapy) |c SNOMED 46973005 | Blood pressure taking (procedure) |c

has body siteop / has codeop : descendants of the given classes are allowed

SNOMED 113257007 | Structure of cardiovascular system (body structure) |c SNOMED 40983000 | Structure of upper extremity between shoulder and elbow (body structure) |c SNOMED 8205005 | Wrist region structure (body structure) |c SNOMED 7569003 | Finger structure (body structure) |c SNOMED 344001 | Ankle region structure (body structure) |c

has mean pressureop / has unitop / has codeop :

ucum:mmsblHgsbrc

has diastolic pressureop / has unitop / has codeop :

ucum:mmsblHgsbrc

Body Heightc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#BodyHeight
Description

height of the individual

Schema representation
Meaning binding
(Equivalent-classes)
LOINC 8302-2 | Body height |c
SNOMED 50373000 | Body height measure (observable entity) |c
Parents
Measurementc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has data provider instituteop
1 .. 1 Data Provider Institutec
has measurement datetimedp
1 .. 1 xsd:dateTimec
has administrative caseop
0 .. 1 Administrative Casec
has quantityop
1 .. 1 Quantityc
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
Restrictions None

Body Mass Indexc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#BodyMassIndex
Description

body weight in kilograms divided by the square of the body height in meters

Schema representation
Meaning binding
(Equivalent-classes)
LOINC 39156-5 | Body mass index (BMI) [Ratio] |c
SNOMED 60621009 | Body mass index (observable entity) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has data provider instituteop
1 .. 1 Data Provider Institutec
has determination datetimedp
0 .. 1 xsd:dateTimec
has administrative caseop
0 .. 1 Administrative Casec
has quantityop
1 .. 1 Yes
Restrictions
has quantityop / has unitop / has codeop :

ucum:kgperm2c

Body Positionc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#BodyPosition
Description

position of the body during a certain time interval, examination or therapy

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 397155001 | Body position (observable entity) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has administrative caseop
0 .. 1 Administrative Casec
has end datetimedp
0 .. 1 xsd:dateTimec
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has start datetimedp
0 .. 1 xsd:dateTimec
has data provider instituteop
1 .. 1 Data Provider Institutec
has codeop
1 .. 1 Yes
Restrictions
has codeop : descendants of the given classes are allowed

SNOMED 9851009 | Body position finding (finding) |c

Body Sitec # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#BodySite
Description

any anatomical structure, any nonspecific and anatomical site, as well as morphologic abnormalities

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 123037004 | Body structure (body structure) |c
LOINC 39111-0 | Body site |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has lateralityop
0 .. 1 Lateralityc
has codeop
1 .. 1 Yes
Restrictions
has codeop : descendants of the given classes are allowed

SNOMED 123037004 | Body structure (body structure) |c

Used in
(In the range of)
has resting pointop
has body siteop
has manifestation body siteop
has progression body siteop
has insertion pointop

Body Surface Areac # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#BodySurfaceArea
Description

two dimensional measure of the outer layer of the body

Schema representation
Meaning binding
(Equivalent-classes)
LOINC 8277-6 | Body surface area |c
SNOMED 301898006 | Body surface area (observable entity) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has administrative caseop
0 .. 1 Administrative Casec
has quantityop
1 .. 1 Yes
has calculation methodop
0 .. 1 Yes
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has data provider instituteop
1 .. 1 Data Provider Institutec
has determination datetimedp
0 .. 1 xsd:dateTimec
Restrictions
has quantityop / has unitop / has codeop :

ucum:m2c

has calculation methodop :

Body Surface Area calculation methodc

Body Temperaturec # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#BodyTemperature
Description

body temperature of the individual

Schema representation
Meaning binding
(Equivalent-classes)
LOINC 8310-5 | Body temperature |c
SNOMED 386725007 | Body temperature (observable entity) |c
Parents
Measurementc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has administrative caseop
0 .. 1 Administrative Casec
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has body siteop
0 .. 1 Body Sitec
has quantityop
1 .. 1 Quantityc
has data provider instituteop
1 .. 1 Data Provider Institutec
has measurement datetimedp
1 .. 1 xsd:dateTimec
Restrictions None

Body Weightc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#BodyWeight
Description

weight of the individual

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 27113001 | Body weight (observable entity) |c
LOINC 29463-7 | Body weight |c
Parents
Measurementc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has measurement datetimedp
1 .. 1 xsd:dateTimec
has administrative caseop
0 .. 1 Administrative Casec
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has data provider instituteop
1 .. 1 Data Provider Institutec
has quantityop
1 .. 1 Quantityc
Restrictions None

Cardiac Indexc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#CardiacIndex
Description

cardiac output in relation to the body surface area (BSA)

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 54993008 | Cardiac index (observable entity) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has data provider instituteop
1 .. 1 Data Provider Institutec
has determination datetimedp
0 .. 1 xsd:dateTimec
has administrative caseop
0 .. 1 Administrative Casec
has method codeop
0 .. 1 Yes
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has quantityop
1 .. 1 Yes
Restrictions
has method codeop : descendants of the given classes are allowed

SNOMED 63075001 | Monitoring of cardiac output/cardiac index (regime/therapy) |c

has quantityop / has unitop / has codeop :

ucum:Lperminperm2c

Cardiac Outputc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#CardiacOutput
Description

volume of blood passing through the heart per unit of time

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 82799009 | Cardiac output (observable entity) |c
Parents
Measurementc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has data provider instituteop
1 .. 1 Data Provider Institutec
has measurement datetimedp
0 .. 1 xsd:dateTimec
has administrative caseop
0 .. 1 Administrative Casec
has method codeop
0 .. 1 Yes
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has quantityop
1 .. 1 Yes
Restrictions
has method codeop : descendants of the given classes are allowed

SNOMED 63075001 | Monitoring of cardiac output/cardiac index (regime/therapy) |c SNOMED 117610000 | Measurement of cardiac output (procedure) |c

has quantityop / has unitop / has codeop :

ucum:Lperminc

Care Handlingc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#CareHandling
Description

describes the relationship between the individual and care provider institute

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 225365006 | Care regime (regime/therapy) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has type codeop
1 .. 1 Yes
Restrictions
has type codeop : descendants of the given classes are not allowed

SNOMED 394656005 | Inpatient care (regime/therapy) |c SNOMED 371883000 | Outpatient procedure (procedure) |c SNOMED 304903009 | Provision of day care (regime/therapy) |c

Used in
(In the range of)
has care handlingop

Chromosomal Locationc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#ChromosomalLocation
Description

chromosome locus defined as cytoband intervals

Schema representation
Meaning binding
(Equivalent-classes)
SO 0000830 | chromosome_part |c
GENO 0000614 | chromosomal region |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has end cytoband codeop
1 .. 1 Yes
has start cytoband codeop
1 .. 1 Yes
has chromosomeop
1 .. 1 Chromosomec
Restrictions
has end cytoband codeop :

Codec

has start cytoband codeop :

Codec

Notes

sphn:hasEndCytobandCode allowed coding system: ISCN

sphn:hasStartCytobandCode allowed coding system: ISCN

Used in
(In the range of)
has chromosomal locationop

Chromosomec # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#Chromosome
Description

thread-like structure composed of tightly coiled DNA and histones or circular DNA (mitochondrial DNA). These structures act as carriers of genetic information

Schema representation
Meaning binding
(Equivalent-classes)
LOINC 48000-4 | Chromosome [Identifier] in Blood or Tissue by Molecular genetics method |c
SNOMED 91272006 | Chromosome (cell structure) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has codeop
1 .. 1 Yes
Restrictions
has codeop : descendants of the given classes are allowed

SNOMED 91272006 | Chromosome (cell structure) |c

Used in
(In the range of)
has chromosomeop

Circumference Measurec # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#CircumferenceMeasure
Description

circumference measurement of a body site

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 248365001 | Circumference measure (observable entity) |c
Parents
Measurementc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has data provider instituteop
1 .. 1 Data Provider Institutec
has body siteop
1 .. 1 Yes
has quantityop
1 .. 1 Quantityc
has measurement datetimedp
1 .. 1 xsd:dateTimec
has administrative caseop
0 .. 1 Administrative Casec
Restrictions
has body siteop / has codeop : descendants of the given classes are not allowed

SNOMED 69536005 | Head structure (body structure) |c SNOMED 33673004 | Structure of waist (surface region) (body structure) |c SNOMED 29836001 | Hip region structure (body structure) |c SNOMED 45048000 | Neck structure (body structure) |c

Civil Statusc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#CivilStatus
Description

the civil status indicates the familial and social situation of the individual

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 365581002 | Finding of marital or partnership status (finding) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has codeop
1 .. 1 Yes
has event datetimedp
0 .. 1 xsd:dateTimec
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
Restrictions
has codeop : descendants of the given classes are not allowed

SNOMED 125681006 | Single person (finding) |c SNOMED 87915002 | Married (finding) |c SNOMED 33553000 | Widowed (finding) |c SNOMED 20295000 | Divorced (finding) |c SNOMED 14012001 | Common law partnership (finding) |c SNOMED 266945001 | Broken with partner (finding) |c

Codec # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#Code
Description

symbols and/or expressions defined in a coding system

Schema representation
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has namedp
0 .. 1 xsd:stringc
has coding system and versiondp
1 .. 1 xsd:stringc
has identifierdp
1 .. 1 xsd:stringc
Restrictions None
Used in
(In the range of)
has manifestation codeop
has severity codeop
has exposure route codeop
has type codeop
has reason to stop codeop
has zygosity codeop
has administration route codeop
has end cytoband codeop
has product codeop
has codeop
has status codeop
has start cytoband codeop
has qualitative result codeop
has verification status codeop
has certainty codeop
has relative temporality codeop
has regularity codeop
has material type codeop
has reaction type codeop
has manifestation severity codeop
has morphology codeop
has format codeop
has allele origin codeop
has scoring system codeop
has method codeop
has topography codeop

Data Determinationc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#DataDetermination
Description

describes how the data was determined, e.g. measured, calculated

Schema representation
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has method codeop
1 .. 1 Yes
Restrictions
has method codeop : descendants of the given classes are not allowed

SNOMED 258104002 | Measured (qualifier value) |c SNOMED 258090004 | Calculated (qualifier value) |c SNOMED 87982008 | Manual (qualifier value) |c SNOMED 414135002 | Estimated (qualifier value) |c SNOMED 263760002 | Forced (qualifier value) |c

Used in
(In the range of)
has data determinationop

Data Filec # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#DataFile
Description

electronic resource of information, which can be stored, accessed and transferred as a single unit

Schema representation
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has uniform resource identifierdp
0 .. 1 xsd:stringc
has format codeop
0 .. 1 Yes
has namedp
0 .. 1 xsd:stringc
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has data provider instituteop
1 .. 1 Data Provider Institutec
Restrictions
has format codeop :

Codec

Notes

sphn:hasFormatCode allowed coding system: EDAM:format_1915

Used in
(In the range of)
has data fileop

Data Provider Institutec # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#DataProviderInstitute
Description

institute providing the data

Schema representation
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has codeop
1 .. 1 Yes
Restrictions
has codeop :

Codec

Notes

sphn:hasCode allowed coding system: UID

Used in
(In the range of)
has data provider instituteop

Data Releasec # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#DataRelease
Description

Metadata about the release of the data

Schema representation
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has extraction datetimedp
1 .. 1 xsd:dateTimec
Restrictions None

Death Datec # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#DeathDate
Description

the date and time of death of the individual

Schema representation
Meaning binding
(Equivalent-classes)
LOINC 81954-0 | Date of death [Date] |c
SNOMED 399753006 | Date of death (observable entity) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has timedp
0 .. 1 xsd:timec
has yeardp
1 .. 1 xsd:gYearc
has subject pseudo identifierop
1 .. * Subject Pseudo Identifierc
has monthdp
0 .. 1 xsd:gMonthc
has daydp
0 .. 1 xsd:gDayc
Restrictions None
Used in
(In the range of)
has death dateop

Death Statusc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#DeathStatus
Description

death information availability

Schema representation
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has codeop
1 .. 1 Yes
has death dateop
0 .. 1 Death Datec
has subject pseudo identifierop
1 .. * Subject Pseudo Identifierc
Restrictions
has codeop : descendants of the given classes are not allowed

SNOMED 419099009 | Dead (finding) |c

Diagnosisc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#Diagnosis
Description

determination of the presence of a disease, condition, or injury from expressed signs and symptoms and assessments such as physical examination, laboratory test, or the like

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 439401001 | Diagnosis (observable entity) |c
Parents
SPHN Conceptc
Children
(Sub-classes)
FOPH Diagnosisc
Nursing Diagnosisc
ICD-O Diagnosisc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has record datetimedp
0 .. 1 xsd:dateTimec
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has data provider instituteop
1 .. 1 Data Provider Institutec
has codeop
1 .. * Codec or Terminologyc
has coding datetimedp
0 .. 1 xsd:dateTimec
has subject ageop
0 .. 1 Agec
has administrative caseop
0 .. 1 Administrative Casec
Restrictions None
Notes

sphn:hasCode allowed coding system: SNOMED CT, ICD-10, ICD-O-3 Topography, ICD-O-3 Morphology, NANDA, ORPHA or other

Used in
(In the range of)
has indication to startop

Diagnostic Radiologic Examinationc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#DiagnosticRadiologicExamination
Description

radiographic procedure using the emission of x-rays to form an image of the structure penetrated by the radiation

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 363680008 | Radiographic imaging procedure (procedure) |c
Parents
Procedurec
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has methodop
0 .. 1 Yes
has start datetimedp
1 .. 1 xsd:dateTimec
has data provider instituteop
1 .. 1 Data Provider Institutec
has codeop
1 .. 1 Yes
has administrative caseop
0 .. 1 Administrative Casec
has end datetimedp
0 .. 1 xsd:dateTimec
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has intentop
0 .. 1 Intentc
has body siteop
0 .. 1 Body Sitec
has coding datetimedp
0 .. 1 xsd:dateTimec
has radiation quantityop
0 .. 1 Yes
Restrictions
has methodop :

Diagnostic Radiologic Examination methodc

has codeop : descendants of the given classes are allowed

CHOP 00.21 | Imagerie intravasculaire de vaisseaux cérébraux extracrâniens |c CHOP 00.22 | Diagnostica per immagine di vasi intratoracici |c CHOP 00.23 | Intravaskuläre Bildgebung von peripheren Gefässen |c CHOP 00.25 | Imagerie intravasculaire de vaisseaux rénaux |c CHOP 00.28 | Diagnostica per immagine endovascolare, altri vasi specificati |c CHOP 87.01 | Pneumoencefalografia |c CHOP 87.02 | Sonstige Kontrastradiographie von Gehirn und Schädel |c CHOP 87.03 | Tomografia assiale computerizzata [TAC] della testa |c CHOP 87.04.00 | Altra tomografia della testa, NAS |c CHOP 87.04.10 | Tomographie axiale computérisée des os de la face, des sinus nasaux, de l’os maxillaire, de la mandibule, des dents, des articulations temporo-mandibulaires et de la base du crâne |c CHOP 87.04.11 | Computertomographie des Halses |c CHOP 87.04.99 | Altra tomografia della testa, altro |c CHOP 87.05 | Dacriocistografia con contrasto |c CHOP 87.06 | Radiografia con contrasto del nasofaringe |c CHOP 87.07 | Laryngographie contrastée |c CHOP 87.08 | Lymphangiographie cervicale |c CHOP 87.09.00 | Sonstige Weichteil-Radiographie von Gesicht, Kopf und Hals, n.n.bez. |c CHOP 87.09.10 | Sialendographie diagnostique |c CHOP 87.09.99 | Sonstige Weichteil-Radiographie von Gesicht, Kopf und Hals, sonstige |c CHOP 87.12 | Sonstige Zahnradiographie |c CHOP 87.13 | Artrografia temporomandibolare con contrasto |c CHOP 87.14 | Radiographie contrastée de l’orbite |c CHOP 87.15 | Sinographie |c CHOP 87.18 | Schädel Spezialaufnahme |c CHOP 87.21.00 | Mielografia con contrasto, NAS |c CHOP 87.21.10 | Discografia vertebrale |c CHOP 87.21.99 | Kontrast-Myelographie, sonstige |c CHOP 87.22 | Altra radiografia della colonna cervicale |c CHOP 87.23 | Altra radiografia della colonna toracica |c CHOP 87.24 | Autre radiographie de la colonne lombo-sacrée |c CHOP 87.29 | Altra radiografia della colonna |c CHOP 87.31 | Endotracheale Bronchographie |c CHOP 87.32 | Altra broncografia con contrasto |c CHOP 87.33 | Pneumographie médiastinale |c CHOP 87.34 | Linfangiografia intratoracica |c CHOP 87.35 | Galaktographie |c CHOP 87.36 | Xéromammographie |c CHOP 87.37.00 | Sonstige Mammographie, n.n.bez. |c CHOP 87.37.10 | Zystographie der Mamma mit Luft oder Kontrastmittel |c CHOP 87.37.99 | Sonstige Mammographie, sonstige |c CHOP 87.38 | Fistulographie der Brustwand |c CHOP 87.39 | Autre radiographie des tissus mous de la paroi thoracique |c CHOP 87.41.00 | Tomografia assiale computerizzata del torace, NAS |c CHOP 87.41.10 | Tomografia assiale computerizzata del cuore, NAS |c CHOP 87.41.11 | Tomographie axiale computérisée du cœur natif, au repos |c CHOP 87.41.12 | Tomographie axiale computérisée du cœur natif, sous épreuve d’effort physique |c CHOP 87.41.13 | Tomographie axiale computérisée du cœur natif, sous épreuve d’effort médicamenteuse |c CHOP 87.41.14 | Computertomographie des Herzens, mit Kontrastmittel, in Ruhe |c CHOP 87.41.15 | Tomographie axiale computérisée du cœur avec produit de contraste, sous épreuve d’effort physique |c CHOP 87.41.16 | Tomografia assiale computerizzata del cuore, con mezzo di contrasto, sotto stress farmacologico |c CHOP 87.41.19 | Tomografia assiale computerizzata del cuore, altro |c CHOP 87.41.99 | Tomografia assiale computerizzata del torace, altro |c CHOP 87.49 | Autre radiographie du thorax |c CHOP 87.51 | Cholangiographie percutanée |c CHOP 87.52 | Cholangiographie intraveineuse |c CHOP 87.53 | Intraoperative Cholangiographie |c CHOP 87.54.00 | Autre cholangiographie, SAP |c CHOP 87.54.10 | Colangiografia successiva a ERCP |c CHOP 87.54.99 | Altra colangiografia, altro |c CHOP 87.59.00 | Altra radiografia delle vie biliari, NAS |c CHOP 87.59.10 | Colecistografia per via orale |c CHOP 87.59.99 | Altra radiografia delle vie biliari, altro |c CHOP 87.61.00 | Pasto baritato, NAS |c CHOP 87.61.10 | Faringo-esofagografia |c CHOP 87.61.99 | Ösophagusbreischluck, sonstige |c CHOP 87.62 | Magen-Darm-Passage |c CHOP 87.63 | Radiographie de l’intestin grêle |c CHOP 87.64.00 | Clisma opaco, NAS |c CHOP 87.64.10 | Radiographie du côlon en simple contraste |c CHOP 87.64.20 | Radiographie du côlon en double contraste (Holzknecht) |c CHOP 87.64.30 | Défécographie |c CHOP 87.64.99 | Radiographie du tractus digestif inférieur, autre |c CHOP 87.65 | Altra radiografia dell’intestino |c CHOP 87.66 | Radiografia del pancreas con contrasto |c CHOP 87.69 | Autre radiographie du tractus digestif, autre |c CHOP 87.71 | Tomographie axiale computérisée de rein |c CHOP 87.72 | Sonstige Tomographie der Niere |c CHOP 87.73 | Intravenöse Urographie |c CHOP 87.74 | Pyélographie rétrograde |c CHOP 87.75 | Pielografia percutanea |c CHOP 87.76.00 | Cistouretrografia retrograda, NAS |c CHOP 87.76.10 | Zystographie |c CHOP 87.76.99 | Cysto-urétrographie rétrograde, autre |c CHOP 87.77.00 | Autre cystographie, SAP |c CHOP 87.77.10 | Cistourografia minzionale [CUM] |c CHOP 87.77.99 | Sonstige Zystographie, sonstige |c CHOP 87.78 | Radiographie de vessie iléale |c CHOP 87.79 | Radiographie der Harnwege, sonstige |c CHOP 87.81 | Radiographie d’utérus gravide |c CHOP 87.82 | Gas-Hysterosalpingographie |c CHOP 87.83 | Hystérosalpingographie avec produit de contraste (opaque) |c CHOP 87.84 | Perkutane Hysterographie |c CHOP 87.85 | Sonstige Radiographie von Tubae uterinae und Uterus |c CHOP 87.89 | Radiografia degli organi genitali femminili, altro |c CHOP 87.91 | Vesciculografia seminale con contrasto |c CHOP 87.92 | Autre radiographie de la prostate et des vésicules séminales |c CHOP 87.93 | Röntgenkontrastdarstellung der Epididymis |c CHOP 87.94 | Déférentographie |c CHOP 87.95 | Altra radiografia dell’epididimo e dotti deferenti |c CHOP 87.99 | Radiographie der männlichen Genitalorgane, sonstige |c CHOP 88.01.00 | Tomografia assiale computerizzata dell’addome, NAS |c CHOP 88.01.10 | Tomographie axiale computérisée de l’abdomen entier |c CHOP 88.01.20 | Computertomographie Oberbauch |c CHOP 88.01.99 | Computertomographie des Abdomens, sonstige |c CHOP 88.02 | Sonstige Tomographie des Abdomens |c CHOP 88.03 | Fistolografia della parete addominale |c CHOP 88.04 | Abdominale Lymphographie |c CHOP 88.09 | Altra radiografia dei tessuti molli dell’addome |c CHOP 88.11 | Pelvigraphie mit Kontrastmittel |c CHOP 88.12 | Pneumo-Pelvigraphie |c CHOP 88.13 | Altra pneumografia peritoneale |c CHOP 88.14 | Retroperitoneale Fistulographie |c CHOP 88.15 | Pneumografia retroperitoneale |c CHOP 88.16 | Autre radiographie rétropéritonéale |c CHOP 88.19 | Sonstige Radiographie des Abdomens, sonstige |c CHOP 88.21 | Skelettröntgen von Schulter und Oberarm |c CHOP 88.22 | Radiografia (delle ossa) del gomito e dell’avambraccio |c CHOP 88.23 | Skelettröntgen von Handgelenk und Hand |c CHOP 88.24 | Radiographie (des os) du membre supérieur, SAP |c CHOP 88.25 | Pelvimetrie |c CHOP 88.26 | Autre radiographie (des os) du bassin et de la hanche |c CHOP 88.27 | Skelettröntgen von Oberschenkel, Knie und Unterschenkel |c CHOP 88.28 | Skelettröntgen von Sprunggelenk und Fuss |c CHOP 88.29 | Altre radiografie (delle ossa) dell’arto inferiore, NAS |c CHOP 88.31 | Segmenti scheletrici |c CHOP 88.32 | Arthrographie de contraste |c CHOP 88.33 | Sonstiges Skelettröntgen |c CHOP 88.34 | Lymphographie du membre supérieur |c CHOP 88.35 | Autre radiographie des tissus mous du membre supérieur |c CHOP 88.36 | Lymphographie du membre inférieur |c CHOP 88.37 | Autre radiographie des tissus mous du membre inférieur |c CHOP 88.38.00 | Sonstige Computertomographie, n.n.bez. |c CHOP 88.38.20 | Computertomographie des Schultergelenkes und der Oberarme |c CHOP 88.38.21 | Computertomographie der Ellenbogengelenke und der Vorderarme |c CHOP 88.38.22 | Computertomographie der Handgelenke und der Hand |c CHOP 88.38.30 | Tomografia assiale computerizzata dell’anca e della coscia |c CHOP 88.38.31 | Tomografia assiale computerizzata del ginocchio e della gamba |c CHOP 88.38.32 | Computertomographie des Fusses und der Sprunggelenke |c CHOP 88.38.40 | Computertomographie der Wirbelsäule |c CHOP 88.38.41 | Computertomographie des Beckens und des Iliosakralgelenkes |c CHOP 88.38.50 | Angiografia-TAC di tutti i vasi |c CHOP 88.38.51 | Ganzkörper-Computertomographie |c CHOP 88.38.60 | Intervention guidée par CT |c CHOP 88.38.99 | Altra tomografia assiale computerizzata, altro |c CHOP 88.39.00 | Altra radiografia non specificata, NAS |c CHOP 88.39.10 | Radiographie peropératoire |c CHOP 88.39.20 | Radioscopia funzionale, NAS |c CHOP 88.39.21 | Radioscopia funzionale, articolazioni, torace, colonna vertebrale |c CHOP 88.39.30 | Interventionen unter Durchleuchtung |c CHOP 88.39.99 | Sonstige und nicht bezeichnete Radiographie, sonstige |c CHOP 88.40 | Arteriografia con mezzo di contrasto, sede non specificata |c CHOP 88.41.11 | Arteriographie der Zerebralarterien |c CHOP 88.41.21 | Arteriografia spinale |c CHOP 88.42.00 | Aortographie, n.n.bez. |c CHOP 88.42.10 | Artériographie des membres supérieurs et de l’aorte thoracique |c CHOP 88.42.11 | Artériographie, aorte abdominale |c CHOP 88.42.99 | Aortografia, altro |c CHOP 88.43 | Arteriographie der Pulmonalarterien |c CHOP 88.44 | Artériographies d’autres vaisseaux intrathoraciques |c CHOP 88.45 | Artériographie rénale |c CHOP 88.46 | Arteriografia della placenta |c CHOP 88.47 | Artériographie d’autres artères abdominales |c CHOP 88.48.00 | Arteriographie der A. femoralis und anderer Arterien der unteren Extremitäten, n.n.bez. |c CHOP 88.48.10 | Arteriografia delle gambe |c CHOP 88.48.99 | Arteriographie der A. femoralis und anderer Arterien der unteren Extremitäten, sonstige |c CHOP 88.49.00 | Artériographie d’autres sites spécifiés, SAP |c CHOP 88.49.10 | Angiographie de shunt de dialyse, par ponction directe |c CHOP 88.49.11 | Artériographie, vue d’ensemble des artères du bassin |c CHOP 88.49.99 | Arteriografia di altre sedi specificate, altro |c CHOP 88.50 | Angiocardiografia, NAS |c CHOP 88.51 | Angiocardiografia della vena cava |c CHOP 88.52 | Angiocardiografia del cuore destro |c CHOP 88.53 | Angiokardiographie von Strukturen des linken Herzens |c CHOP 88.54 | Angiographie du cœur combinée, gauche et droite |c CHOP 88.55 | Arteriografia coronarica con catetere singolo |c CHOP 88.56 | Artériographie coronaire avec deux cathéters |c CHOP 88.57 | Sonstige und nicht näher bezeichnete koronare Arteriographie |c CHOP 88.58 | Negativ-Kontrast Radiographie des Herzens |c CHOP 88.59 | Intraoperative Fluoreszenzangiographie der Gefässe |c CHOP 88.60 | Phlebographie mit Kontrastmittel, nicht näher bezeichnete Lokalisation |c CHOP 88.61.00 | Phlébographie des veines de la tête et du cou avec matériel de contraste, SAP |c CHOP 88.61.10 | Phlébographie des veines intracrâniennes |c CHOP 88.61.99 | Flebografia con mezzo di contrasto delle vene della testa e del collo, altro |c CHOP 88.62 | Phlebographie der Pulmonalvenen mit Kontrastmittel |c CHOP 88.63.00 | Phlebographie anderer intrathorakaler Venen mit Kontrastmittel, n.n.bez. |c CHOP 88.63.10 | Phlebographie der V. cava superior |c CHOP 88.63.99 | Flebografia con mezzo di contrasto di altre vene intratoraciche, altro |c CHOP 88.64 | Portographie mit Kontrastmittel |c CHOP 88.65 | Flebografia con mezzo di contrasto di altre vene intraaddominali |c CHOP 88.66 | Phlébographie des veines fémorales et des membres inférieurs avec matériel de contraste |c CHOP 88.67 | Phlébographie d’autres sites spécifiés avec matériel de contraste |c CHOP 88.68 | Phlébographie d’impédance |c CHOP 88.69 | Flebografia delle vene degli arti superiori |c CHOP 88.90.10 | Fistulographie |c CHOP 88.90.30 | Intervento guidato da radiografia |c CHOP 88.91.00 | Risonanza magnetica nucleare [RMN, MRI, RMN] del cervello e del tronco encefalico, NAS |c CHOP 88.91.10 | Imagerie par résonance magnétique [IRM], cerveau et tronc cérébral |c CHOP 88.91.11 | Funktionelle Kernspintomographie von Gehirn und Hirnstamm |c CHOP 88.91.99 | Risonanza magnetica nucleare [RMN, MRI, RMN] del cervello e del tronco encefalico, altro |c CHOP 88.92.00 | Kernspintomographie von Thorax und Myokard, n.n.bez. |c CHOP 88.92.10 | RMN del torace, NAS |c CHOP 88.92.11 | RMN del torace, a riposo, NAS |c CHOP 88.92.12 | IRM du thorax, au repos, avec produit de contraste |c CHOP 88.92.13 | MRI von Thorax mit Belastung, n.n.bez. |c CHOP 88.92.14 | MRI von Thorax mit Belastung und Kontrastmittel |c CHOP 88.92.19 | RMN del torace, altro |c CHOP 88.92.20 | MRI von Herz und zentralen Gefäss, n.n.bez. |c CHOP 88.92.21 | RMN di cuore e vasi centrali, a riposo, NAS |c CHOP 88.92.22 | MRI von Herz und zentralen Gefäss in Ruhe, mit Kontrastmittel |c CHOP 88.92.23 | IRM du cœur et des vaisseaux centraux, à l’effort, SAP |c CHOP 88.92.24 | RMN di cuore e vasi centrali, sotto sforzo e con mezzo di contrasto |c CHOP 88.92.29 | MRI von Herz und zentralen Gefäss, sonstige |c CHOP 88.92.30 | MRI von hilären und mediastinalen Strukturen, n.n.bez. |c CHOP 88.92.31 | RMN di strutture ilari e mediastiniche, a riposo, NAS |c CHOP 88.92.32 | RMN di strutture ilari e mediastiniche, a riposo, con mezzo di contrasto |c CHOP 88.92.33 | RMN di strutture ilari e mediastiniche sotto sforzo, NAS |c CHOP 88.92.34 | RMN di strutture ilari e mediastiniche sotto sforzo e con mezzo di contrasto |c CHOP 88.92.39 | IRM des structures hilaires et médiastinales, autre |c CHOP 88.92.99 | Risonanza magnetica nucleare [RMN, MRI, RMN] di torace e miocardio, altro |c CHOP 88.94.00 | Imagerie par résonance magnétique de l’appareil musculo-squelettique, SAP |c CHOP 88.94.10 | MRI-Schultergelenk und Oberarme |c CHOP 88.94.11 | IRM des coudes et des avant-bras |c CHOP 88.94.12 | MRI-Handgelenke und Hand |c CHOP 88.94.13 | IRM des hanches et des cuisses |c CHOP 88.94.14 | MRI-Kniegelenk und Unterschenkel |c CHOP 88.94.16 | RMN di piede e caviglia, articolazioni del piede |c CHOP 88.94.99 | Risonanza magnetica nucleare [RMN, MRI, RMN] muscoloscheletrica, altro |c CHOP 88.95 | Risonanza magnetica nucleare [RMN, MRI, RMN] di pelvi, prostata e vescica |c CHOP 88.96 | Altra risonanza magnetica nucleare [RMN, MRI, RMN] intraoperatoria |c CHOP 88.97.00 | Kernspintomographie anderer und nicht definierter Lokalisationen, n.n.bez. |c CHOP 88.97.10 | MRI-Angiographie aller Gefässe |c CHOP 88.97.11 | MRI-Spektroskopie |c CHOP 88.97.12 | Ganzkörper-MRI |c CHOP 88.97.14 | IRM: vue d’ensemble et partielle de la colonne vertébrale |c CHOP 88.97.15 | IRM: os faciaux/sinus nasaux |c CHOP 88.97.16 | IRM: cou |c CHOP 88.97.17 | RMN dell’addome, pelvi |c CHOP 88.97.18 | MRI-Defäkographie |c CHOP 88.97.19 | RMN della/e mammella/e |c CHOP 88.97.20 | Colangiopancreatografia in risonanza magnetica [MRCP] |c CHOP 88.97.99 | Kernspintomographie anderer und nicht definierter Lokalisationen, sonstige |c CHOP 88.98.00 | Détermination de la densité minérale osseuse, SAP |c CHOP 88.98.10 | Densitometria ossea con dual energy X-ray absorptiometry [DXA] |c CHOP 88.98.99 | Radiologische Mineralgehaltsbestimmung, sonstige |c CHOP 92.01 | Scintigraphie thyroïdienne avec étude de fonction radio-isotopique |c CHOP 92.02 | Scintigraphie hépatique avec étude de fonction radio-isotopique |c CHOP 92.03 | Scintigraphie rénale avec étude de fonction radio-isotopique |c CHOP 92.04 | Scintigraphie gastro-intestinale avec étude de fonction radio-isotopique |c CHOP 92.05.00 | Kardiovaskuläre und hämatopoetische Szintigraphie und Radioisotopenfunktionsstudie, n.n.bez. |c CHOP 92.05.09 | Kardiovaskuläre und hämatopoetische Szintigraphie und Radioisotopenfunktionsstudie, sonstige |c CHOP 92.05.10 | Myokardperfusionsszintigraphie, n.n.bez. |c CHOP 92.05.11 | Scintigraphie par perfusion myocardique, au repos |c CHOP 92.05.12 | Myokardperfusionsszintigraphie mit physikalischer Belastung |c CHOP 92.05.13 | Myokardperfusionsszintigraphie mit pharmakologischer Belastung |c CHOP 92.05.14 | Single Photon Emission Computed Tomography [SPECT], Myokard |c CHOP 92.05.19 | Scintigraphie par perfusion myocardique, autre |c CHOP 92.09.00 | Sonstige Radioisotopenfunktionsstudie, n.n.bez. |c CHOP 92.09.10 | Single Photon Emission Computed Tomography [SPECT], andere Lokalisationen |c CHOP 92.09.99 | Sonstige Radioisotopenfunktionsstudie, sonstige |c CHOP 92.11.00 | Tomografia a emissione di positroni del cervello |c CHOP 92.11.08 | Autre scintigraphie cérébrale |c CHOP 92.12 | Szintigraphie anderer Lokalisationen am Kopf |c CHOP 92.13 | Scintigraphie parathyroïdienne |c CHOP 92.14 | Scintigrafia ossea |c CHOP 92.15 | Scintigraphie pulmonaire |c CHOP 92.16 | Scintigrafia del sistema linfatico |c CHOP 92.18.00 | Ganzkörperszintigraphie, n.n.bez. |c CHOP 92.18.01 | Ganzkörperszintigraphie zur Lokalisationsdiagnostik, Tumorszintigraphie mit Antikörpern oder rezeptorgerichteten Substanzen, n.n.bez. |c CHOP 92.18.02 | Scintigraphie du corps entier pour diagnostic de localisation: scintigraphie du corps entier pour diagnostic inflammatoire |c CHOP 92.18.03 | Scintigrafia total body per la diagnosi di localizzazione: Scintigrafia total body senza radioiodio: con somministrazione di tireotropina ricombinante [rh-TSH] |c CHOP 92.18.04 | Scintigraphie du corps entier pour diagnostic de localisation: scintigraphie du corps entier par iode radioactif: avec administration de thyréotropine recombinante [rh-TSH] |c CHOP 92.18.05 | Radiorezeptoren-selektive prätherapeutische Diagnostik (Ga-68-markiertes Peptid) |c CHOP 92.18.08 | Ganzkörperszintigraphie zur Lokalisationsdiagnostik, sonstige |c CHOP 92.19.00 | Tomographie par émission de positrons du cœur |c CHOP 92.19.01 | Tomografia a emissione di positroni del corpo intero |c CHOP 92.19.02 | Altra tomografia a emissione di positroni |c CHOP 92.19.03 | Positronenemissionstomographie mit F-18-Ethylcholin bei Prostatakarzinom |c CHOP 92.19.04 | Diagnostic d’hypoxie cellulaire après marquage au 18-F-misonidazole |c CHOP 92.19.05 | Tomografia a emissione di positroni con tomografia assiale computerizzata [PET-TAC] del corpo intero / della testa con leganti marcati con DOTA |c CHOP 92.19.06 | Positronenemissionstomographie mit Computertomographie [PET/CT] des gesamten Körperstammes/Kopfes mit 18-F-DOPA |c CHOP 92.19.08 | Sonstige Szintigraphie anderer Lokalisationen |c

has radiation quantityop / has unitop / has codeop :

ucum:Gyc ucum:cGyc ucum:mCic ucum:MBqc

Drugc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#Drug
Description

any substance with the intent to prevent, diagnose, treat, or relieve symptoms of a disease or abnormal condition

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 410942007 | Drug or medicament (substance) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has product codeop
0 .. 1 Yes
has active ingredientop
0 .. * Substancec
has inactive ingredientop
0 .. * Substancec
has manufactured dose formop
0 .. 1 Pharmaceutical Dose Formc
Restrictions
has product codeop :

Codec

Notes

sphn:hasProductCode allowed coding system: GTIN

Used in
(In the range of)
has drugop

Drug Administration Eventc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#DrugAdministrationEvent
Description

single event at which a drug was administered to the patient; this could be a single time point in case of a pill/cream or a duration in case of a single infusion pack or a single patch; one or many drug administration events are initiated by a drug prescription depending on the frequency stated in the prescription

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 182832007 | Procedure related to management of drug administration (procedure) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has end datetimedp
0 .. 1 xsd:dateTimec
has reason to stop codeop
0 .. 1 Yes
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has start datetimedp
1 .. 1 xsd:dateTimec
has time patternop
0 .. 1 Time Patternc
has data provider instituteop
1 .. 1 Data Provider Institutec
has durationop
0 .. 1 Quantityc
has administration route codeop
0 .. 1 Yes
has administrative caseop
0 .. 1 Administrative Casec
has drug quantityop
0 .. 1 Quantityc
has drugop
1 .. 1 Drugc
Restrictions
has reason to stop codeop : descendants of the given classes are not allowed

SNOMED 441308009 | New diagnosis (observable entity) |c SNOMED 395009001 | Medication stopped - side effect (situation) |c SNOMED 182872003 | Drug discontinued - too expensive (situation) |c SNOMED 182846007 | Doctor stopped drugs - medical aim achieved (situation) |c SNOMED 395007004 | Medication stopped - ineffective (situation) |c SNOMED 31438003 | Drug resistance (disorder) |c SNOMED 182845006 | Doctor stopped drugs - avoid interaction (situation) |c SNOMED 182844005 | Doctor stopped drugs - patient dislikes (situation) |c SNOMED 419620001 | Death (event) |c SNOMED 399307001 | Lost to follow-up (finding) |c SNOMED 74964007 | Other (qualifier value) |c

has administration route codeop : descendants of the given classes are allowed

SNOMED 284009009 | Route of administration value (qualifier value) |c

Used in
(In the range of)
has oxygen flow rateop

Drug Prescriptionc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#DrugPrescription
Description

plan that defines at which frequency a drug should be administered to a patient with a given quantity; at every frequency time point a drug administration event should occur

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 33633005 | Prescription of drug (procedure) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has administration route codeop
0 .. 1 Yes
has last administration datetimedp
0 .. 1 xsd:dateTimec
has first administration datetimedp
1 .. 1 xsd:dateTimec
has drug quantityop
0 .. 1 Quantityc
has drugop
1 .. 1 Drugc
has frequencyop
0 .. 1 Quantityc
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has intentop
0 .. 1 Intentc
has time patternop
0 .. 1 Time Patternc
has data provider instituteop
1 .. 1 Data Provider Institutec
has indication to startop
0 .. 1 Diagnosisc or Intentc
has administrative caseop
0 .. 1 Administrative Casec
Restrictions
has administration route codeop : descendants of the given classes are allowed

SNOMED 284009009 | Route of administration value (qualifier value) |c

Electrocardiogramc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#Electrocardiogram
Description

output of an electrocardiographic procedure

Schema representation
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has data fileop
1 .. * Data Filec
Restrictions None
Used in
(In the range of)
has outputop

Electrocardiographic Procedurec # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#ElectrocardiographicProcedure
Description

electrographic procedure on the heart which results in a graph of voltage versus time visualizing the electrical activity of the heart muscle using electrodes placed on the skin

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 29303009 | Electrocardiographic procedure (procedure) |c
Parents
Procedurec
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has administrative caseop
0 .. 1 Administrative Casec
has outputop
0 .. 1 Electrocardiogramc
has physiologic stateop
0 .. 1 Yes
has end datetimedp
0 .. 1 xsd:dateTimec
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has intentop
0 .. 1 Yes
has number of leadsop
0 .. 1 Quantityc
has body siteop
0 .. 1 Body Sitec
has coding datetimedp
0 .. 1 xsd:dateTimec
has start datetimedp
1 .. 1 xsd:dateTimec
has data provider instituteop
1 .. 1 Data Provider Institutec
has codeop
1 .. * Yes
Restrictions
has physiologic stateop / has codeop : descendants of the given classes are not allowed

SNOMED 128975004 | Resting state (finding) |c SNOMED 128976003 | Exercise state (finding) |c

has intentop / has codeop : descendants of the given classes are not allowed

SNOMED 360156006 | Screening - procedure intent (qualifier value) |c SNOMED 261004008 | Diagnostic intent (qualifier value) |c

has codeop : descendants of the given classes are allowed

SNOMED 29303009 | Electrocardiographic procedure (procedure) |c

FOPH Diagnosisc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#FOPHDiagnosis
Description

discharge diagnosis given respecting the rules of FOPH and used for building the DRGs, e.g. K35 acute appendicitis

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 89100005 | Final diagnosis (discharge) (contextual qualifier) (qualifier value) |c
LOINC 38999-9 | Hospital discharge DRG [Interpretation] |c
Parents
Diagnosisc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has data provider instituteop
1 .. 1 Data Provider Institutec
has codeop
1 .. 1 Yes
has coding datetimedp
0 .. 1 xsd:dateTimec
has subject ageop
0 .. 1 Agec
has administrative caseop
0 .. 1 Administrative Casec
has record datetimedp
0 .. 1 xsd:dateTimec
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has rankop
0 .. 1 Yes
Restrictions
has codeop :

icd-10-gm:ICD-10-GMc

has rankop :

FOPH Diagnosis rankc

FOPH Procedurec # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#FOPHProcedure
Description

procedure, coded respecting the rules of FOPH and used for building the DRGs, e.g. Z57.34 open biopsy of the urinary bladder

Schema representation
Parents
Procedurec
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has administrative caseop
0 .. 1 Administrative Casec
has end datetimedp
0 .. 1 xsd:dateTimec
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has intentop
0 .. 1 Intentc
has rankop
0 .. 1 Yes
has start datetimedp
1 .. 1 xsd:dateTimec
has data provider instituteop
1 .. 1 Data Provider Institutec
has body siteop
0 .. 1 Body Sitec
has codeop
1 .. 1 Yes
has coding datetimedp
0 .. 1 xsd:dateTimec
Restrictions
has rankop :

FOPH Procedure rankc

has codeop : descendants of the given classes are allowed

CHOP CHOP | CHOP |c

Genec # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#Gene
Description

fundamental unit of heredity that contains necessary elements to encore for a transcript

Schema representation
Meaning binding
(Equivalent-classes)
SO 0000704 | gene |c
SNOMED 67271001 | Gene (substance) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has organismop
0 .. 1 Organismc
has codeop
1 .. 1 Codec or Terminologyc
has transcriptop
0 .. * Transcriptc
has proteinop
0 .. * Proteinc
Restrictions None
Notes

sphn:hasCode allowed coding system: HGNC, NCBI Gene, Ensembl or other

Used in
(In the range of)
has geneop

Genetic Variationc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#GeneticVariation
Description

a genetic variation occurring at a defined position

Schema representation
Meaning binding
(Equivalent-classes)
GENO 0000476 | variant |c
SO 0001060 | sequence_variant |c
Parents
SPHN Conceptc
Children
(Sub-classes)
Single Nucleotide Variationc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has genomic positionop
0 .. 1 Genomic Positionc
has chromosomal locationop
0 .. 1 Chromosomal Locationc
Restrictions None
Used in
(In the range of)
has genetic variationop

Genomic Positionc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#GenomicPosition
Description

genomic position with respect to a reference

Schema representation
Meaning binding
(Equivalent-classes)
GENO 0000902 | genomic feature location |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has enddp
1 .. 1 xsd:doublec
has coordinate conventionop
1 .. 1 Yes
has referenceop
1 .. 1 Referencec
has startdp
1 .. 1 xsd:doublec
Restrictions
has coordinate conventionop :

Genomic Position coordinate conventionc

Used in
(In the range of)
has genomic positionop

Gestational Age At Birthc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#GestationalAgeAtBirth
Description

gestational age of a child at birth

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 412726003 | Length of gestation at birth (observable entity) |c
LOINC 76516-4 | Gestational age--at birth |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has administrative caseop
0 .. * Administrative Casec
has subject pseudo identifierop
1 .. * Subject Pseudo Identifierc
has data provider instituteop
1 .. * Data Provider Institutec
has quantityop
1 .. 1 Yes
Restrictions
has quantityop / has unitop / has codeop :

ucum:dc

Healthcare Encounterc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#HealthcareEncounter
Description

an interaction between an individual and a specific unit or service of a healthcare provider institute, e.g. emergency, intensive care unit, for the purpose of providing healthcare service(s) or assessing the health status of an individual

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 308335008 | Patient encounter procedure (procedure) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has target locationop
0 .. 1 Locationc
has administrative caseop
0 .. 1 Administrative Casec
has identifierdp
1 .. 1 xsd:stringc
has end datetimedp
0 .. 1 xsd:dateTimec
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has start datetimedp
1 .. 1 xsd:dateTimec
has data provider instituteop
1 .. 1 Data Provider Institutec
has therapeutic areaop
0 .. 1 Therapeutic Areac
has origin locationop
0 .. 1 Locationc
has current locationop
1 .. 1 Locationc
Restrictions None

Heart Ratec # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#HeartRate
Description

frequency of the heart beats, i.e. the number of time a heart beats per unit of time

Schema representation
Meaning binding
(Equivalent-classes)
LOINC 8867-4 | Heart rate |c
SNOMED 364075005 | Heart rate (observable entity) |c
Parents
Measurementc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has quantityop
1 .. 1 Quantityc
has data provider instituteop
1 .. 1 Data Provider Institutec
has measurement datetimedp
1 .. 1 xsd:dateTimec
has measurement methodop
0 .. 1 Measurement Methodc
has administrative caseop
0 .. 1 Administrative Casec
has regularity codeop
0 .. 1 Yes
has physiologic stateop
0 .. 1 Physiologic Statec
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has body siteop
0 .. 1 Body Sitec
Restrictions
has regularity codeop : descendants of the given classes are not allowed

SNOMED 271636001 | Pulse regular (finding) |c SNOMED 61086009 | Pulse irregular (finding) |c

ICD-O Diagnosisc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#ICDODiagnosis
Description

ICD-O diagnosis

Schema representation
Parents
Diagnosisc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has administrative caseop
0 .. 1 Administrative Casec
has topography codeop
0 .. 1 Yes
has record datetimedp
0 .. 1 xsd:dateTimec
has morphology codeop
1 .. 1 Yes
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has coding datetimedp
0 .. 1 xsd:dateTimec
has data provider instituteop
1 .. 1 Data Provider Institutec
has subject ageop
0 .. 1 Agec
Restrictions
has topography codeop :

Codec

has morphology codeop :

Codec

Notes

sphn:hasMorphologyCode allowed coding system: ICD-O-3 Morphology

sphn:hasTopographyCode allowed coding system: ICD-O-3 Topography

Inhaled Oxygen Concentrationc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#InhaledOxygenConcentration
Description

fraction of inspired oxygen (FiO2) either calculated knowing the device used and the amount of oxygen administrated or coming from the respiratory system settings

Schema representation
Meaning binding
(Equivalent-classes)
LOINC 3150-0 | Inhaled oxygen concentration |c
SNOMED 250774007 | Inspired oxygen concentration (observable entity) |c
Parents
Measurementc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has quantityop
1 .. 1 Yes
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has data provider instituteop
1 .. 1 Data Provider Institutec
has measurement datetimedp
1 .. 1 xsd:dateTimec
has data determinationop
0 .. 1 Data Determinationc
has oxygen equipmentop
0 .. 1 Medical Devicec
has oxygen flow rateop
0 .. 1 Drug Administration Eventc
has administrative caseop
0 .. 1 Administrative Casec
Restrictions
has quantityop / has unitop / has codeop :

ucum:percentc

Intentc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#Intent
Description

treatment or procedure purpose

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 363675004 | Intents (nature of procedure values) (qualifier value) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has codeop
1 .. 1 Yes
Restrictions
has codeop : descendants of the given classes are allowed

SNOMED 363675004 | Intents (nature of procedure values) (qualifier value) |c

Used in
(In the range of)
has intentop
has indication to startop

Lab Analyzerc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#LabAnalyzer
Description

laboratory analyzer used to assess medical laboratory samples

Schema representation
Parents
Medical Devicec
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has type codeop
0 .. 1 Yes
has product codeop
0 .. 1 Codec or Terminologyc
Restrictions
has type codeop :

Codec

Notes

sphn:hasTypeCode allowed coding system: GMDN, EMDN

sphn:hasProductCode allowed coding system: UDI-DI from GUDID, or other

Used in
(In the range of)
has test kitop
has instrumentop

Lab Resultc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#LabResult
Description

transmitted laboratory analysis results for a specific biosample analyzed

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 118246004 | Laboratory test finding (navigational concept) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has commentdp
0 .. 1 xsd:stringc
has administrative caseop
0 .. 1 Administrative Casec
has quantitative resultop
0 .. 1 Quantityc
has sampleop
0 .. 1 Samplec
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has qualitative resultdp
0 .. 1 xsd:stringc
has reference rangeop
0 .. 1 Reference Rangec
has lab testop
1 .. 1 Lab Testc
has data provider instituteop
1 .. 1 Data Provider Institutec
has report datetimedp
1 .. 1 xsd:dateTimec
has qualitative result codeop
0 .. 1 Codec or Terminologyc
Restrictions None

Lab Testc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#LabTest
Description

lab test information including information elements provided by LOINC, instrument and test kit

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 15220000 | Laboratory test (procedure) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has test kitop
0 .. 1 Lab Analyzerc
has instrumentop
0 .. 1 Lab Analyzerc
has codeop
1 .. 1 Yes
Restrictions
has codeop : descendants of the given classes are allowed

sphn-loinc:LOINCc

Used in
(In the range of)
has lab testop

Lateralityc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#Laterality
Description

localization with respect to the side of the body

Schema representation
Meaning binding
(Equivalent-classes)
LOINC 20228-3 | Anatomic part Laterality |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has codeop
1 .. 1 Yes
Restrictions
has codeop : descendants of the given classes are not allowed

SNOMED 7771000 | Left (qualifier value) |c SNOMED 24028007 | Right (qualifier value) |c SNOMED 51440002 | Right and left (qualifier value) |c SNOMED 66459002 | Unilateral (qualifier value) |c

Used in
(In the range of)
has lateralityop

Locationc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#Location
Description

physical location or medical division taking care of the individual

Schema representation
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has exactdp
0 .. 1 xsd:stringc
has data provider instituteop
1 .. 1 Data Provider Institutec
has type codeop
1 .. 1 Yes
Restrictions
has type codeop : descendants of the given classes are allowed

SNOMED 276339004 | Environment (environment) |c

Used in
(In the range of)
has origin locationop
has locationop
has target locationop
has current locationop
has discharge locationop

Measurementc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#Measurement
Description

annotation used to indicate the size or magnitude of something that was determined by comparison to a standard

Schema representation
Parents
SPHN Conceptc
Children
(Sub-classes)
Body Temperaturec
Oxygen Saturationc
Heart Ratec
Body Weightc
Body Heightc
Blood Pressurec
Inhaled Oxygen Concentrationc
Cardiac Outputc
Circumference Measurec
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has administrative caseop
0 .. 1 Administrative Casec
has quantityop
0 .. 1 Quantityc
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has data provider instituteop
1 .. 1 Data Provider Institutec
has measurement datetimedp
0 .. 1 xsd:dateTimec
Restrictions None

Measurement Methodc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#MeasurementMethod
Description

procedure used to measure an amount, quantity, size, level, extent, or magnitude, resulting in an qualitative or quantitative value

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 122869004 | Measurement procedure (procedure) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has codeop
1 .. 1 Yes
Restrictions
has codeop : descendants of the given classes are allowed

SNOMED 128927009 | Procedure by method (procedure) |c

Used in
(In the range of)
has measurement methodop

Medical Devicec # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#MedicalDevice
Description

product intended for medical use when the main effect is not achieved by a medicinal product; medical devices include, but are not limited to, implants, instruments, devices, in vitro diagnostics

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 63653004 | Biomedical device (physical object) |c
Parents
SPHN Conceptc
Children
(Sub-classes)
Lab Analyzerc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has type codeop
0 .. 1 Yes
has product codeop
0 .. 1 Codec or Terminologyc
Restrictions
has type codeop :

SNOMED 272181003 | Clinical equipment and/or device (physical object) |c Codec Terminologyc

Notes

sphn:hasTypeCode allowed coding system: SNOMED CT or other

Used in
(In the range of)
has medical deviceop
has oxygen equipmentop

Nursing Diagnosisc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#NursingDiagnosis
Description

clinical judgment concerning a human response to health conditions/life processes, or a vulnerability for that response, by an individual, family, group or community; a nursing diagnosis provides the basis for selection of nursing interventions to achieve outcomes for which the nurse has accountability

Schema representation
Parents
Diagnosisc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has data provider instituteop
1 .. 1 Data Provider Institutec
has codeop
1 .. 1 Yes
has subject ageop
0 .. 1 Agec
has administrative caseop
0 .. 1 Administrative Casec
has record datetimedp
0 .. 1 xsd:dateTimec
has coding datetimedp
0 .. 1 xsd:dateTimec
Restrictions
has codeop :

Codec

Notes

sphn:hasCode allowed coding system: NANDA

Oncology Treatment Assessmentc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#OncologyTreatmentAssessment
Description

assessment of oncology treatment

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 370807008 | Evaluation of response to medications (procedure) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has administrative caseop
0 .. 1 Administrative Casec
has method codeop
0 .. 1 Yes
has resultop
0 .. 1 Yes
has progression typeop
0 .. 1 Yes
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has data provider instituteop
1 .. 1 Data Provider Institutec
has criteriaop
0 .. 1 Yes
has assessment datetimedp
1 .. 1 xsd:dateTimec
has progression body siteop
0 .. 1 Body Sitec
Restrictions
has method codeop : descendants of the given classes are not allowed

SNOMED 113091000 | Magnetic resonance imaging (procedure) |c SNOMED 71040008 | Computed tomography follow-up (procedure) |c SNOMED 450436003 | Positron emission tomography with computed tomography (procedure) |c

has resultop :

Oncology Treatment Assessment resultc

has progression typeop :

Oncology Treatment Assessment progression typec

has criteriaop :

Oncology Treatment Assessment criteriac

Organismc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#Organism
Description

living system capable of replicating or reproducing, growth and maintenance. An organism may be unicellular or multicellular

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 410607006 | Organism (organism) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has codeop
1 .. 1 Yes
Restrictions
has codeop :

SNOMED 410607006 | Organism (organism) |c Codec

Notes

sphn:hasCode allowed coding system: SNOMED CT, NCBI Taxon

Used in
(In the range of)
has organismop

Oxygen Saturationc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#OxygenSaturation
Description

fraction of oxygen present in the blood

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 103228002 | Hemoglobin saturation with oxygen (observable entity) |c
Parents
Measurementc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has quantityop
1 .. 1 Yes
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has data provider instituteop
1 .. 1 Data Provider Institutec
has body siteop
0 .. 1 Body Sitec
has measurement datetimedp
0 .. 1 xsd:dateTimec
has measurement methodop
0 .. 1 Measurement Methodc
has administrative caseop
0 .. 1 Administrative Casec
Restrictions
has quantityop / has unitop / has codeop :

ucum:percentc

Notes

sphn:hasBodySite/sphn:hasCode recommended values: 29707007 | Toe structure (body structure), |7569003 | Finger structure (body structure) |, 48800003 | Ear lobule structure (body structure) |

sphn:hasMeasurementMethod/sphn:hasCode recommended values: 252465000 | Pulse oximetry (procedure) |

Pharmaceutical Dose Formc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#PharmaceuticalDoseForm
Description

physical manifestation of a product that contains the active ingredient(s) and/or inactive ingredient(s) that are intended to be delivered to the patient

Schema representation
Meaning binding
(Equivalent-classes)
LOINC 74055-5 | Dose form of Medication |c
SNOMED 736542009 | Pharmaceutical dose form (dose form) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has codeop
1 .. 1 Yes
Restrictions
has codeop :

SNOMED 736542009 | Pharmaceutical dose form (dose form) |c Codec

Notes

sphn:hasCode allowed coding system: SNOMED CT, EDQM:EDQMPDF

Used in
(In the range of)
has manufactured dose formop

Physiologic Statec # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#PhysiologicState
Description

physiologic state of the individual, e.g. resting, exercise

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 128973006 | Finding related physiologic patient state (finding) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has codeop
1 .. 1 Yes
Restrictions
has codeop : descendants of the given classes are allowed

SNOMED 128973006 | Finding related physiologic patient state (finding) |c

Used in
(In the range of)
has physiologic stateop

Problem Conditionc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#ProblemCondition
Description

clinical condition, problem, diagnosis, or other event, situation, issue, or clinical concept that has risen to a level of concern

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 55607006 | Problem (finding) |c
LOINC 44100-6 | Medical problem |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has codeop
0 .. 1 Codec or Terminologyc
has data provider instituteop
1 .. 1 Data Provider Institutec
has relative temporality codeop
0 .. 1 Yes
has onset datetimedp
0 .. 1 xsd:dateTimec
has free textdp
0 .. 1 xsd:stringc
has administrative caseop
0 .. 1 Administrative Casec
has record datetimedp
0 .. 1 xsd:dateTimec
Restrictions
has relative temporality codeop : descendants of the given classes are allowed

SNOMED 307152002 | Temporal periods relating to procedure (qualifier value) |c

Notes

sphn:hasCode allowed coding system: ICPC or other

Procedurec # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#Procedure
Description

invasive or non-invasive intervention performed for, with or on behalf of an individual whose purpose is to assess, improve, maintain, promote or modify health, functioning or health conditions

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 71388002 | Procedure (procedure) |c
Parents
SPHN Conceptc
Children
(Sub-classes)
Radiotherapy Procedurec
Diagnostic Radiologic Examinationc
Electrocardiographic Procedurec
FOPH Procedurec
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has administrative caseop
0 .. 1 Administrative Casec
has end datetimedp
0 .. 1 xsd:dateTimec
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has intentop
0 .. 1 Intentc
has start datetimedp
1 .. 1 xsd:dateTimec
has data provider instituteop
1 .. 1 Data Provider Institutec
has body siteop
0 .. 1 Body Sitec
has codeop
1 .. * Codec or Terminologyc
has coding datetimedp
0 .. 1 xsd:dateTimec
Restrictions None
Notes

sphn:hasCode allowed coding system: SNOMED CT, CHOP or other

Proteinc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#Protein
Description

molecule composed by one or more chains of amino acids

Schema representation
Meaning binding
(Equivalent-classes)
SO 0000104 | polypeptide |c
SNOMED 88878007 | Protein (substance) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has organismop
0 .. 1 Organismc
has codeop
1 .. 1 Codec or Terminologyc
Restrictions None
Notes

sphn:hasCode allowed coding system: UniProtKB or other

Used in
(In the range of)
has proteinop

Quantityc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#Quantity
Description

an amount or a number of something

Schema representation
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has comparatorop
0 .. 1 Yes
has valuedp
1 .. 1 Yes
has unitop
1 .. 1 Unitc
Restrictions
has comparatorop :

Comparatorc

has valuedp :

xsd:doublec

Used in
(In the range of)
has quantitative resultop
has diastolic pressureop
has systolic pressureop
has lower limitop
has tumor purityop
has manifestation durationop
has fractions numberop
has durationop
has drug quantityop
has number of leadsop
has quantityop
has frequencyop
has upper limitop
has radiation quantityop
has exposure durationop
has mean pressureop

Radiotherapy Procedurec # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#RadiotherapyProcedure
Description

given radiotherapy procedure during oncological treatment

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 108290001 | Radiation oncology AND/OR radiotherapy (procedure) |c
Parents
Procedurec
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has fractions numberop
0 .. 1 Quantityc
has coding datetimedp
0 .. 1 xsd:dateTimec
has radiation quantityop
0 .. 1 Yes
has start datetimedp
1 .. 1 xsd:dateTimec
has data provider instituteop
1 .. 1 Data Provider Institutec
has codeop
1 .. * Yes
has administrative caseop
0 .. 1 Administrative Casec
has end datetimedp
0 .. 1 xsd:dateTimec
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has intentop
0 .. 1 Intentc
has body siteop
0 .. 1 Body Sitec
Restrictions
has radiation quantityop / has unitop / has codeop :

ucum:Gyc ucum:cGyc ucum:mCic ucum:MBqc

has codeop : descendants of the given classes are not allowed

SNOMED 33195004 | External beam radiation therapy procedure (procedure) |c SNOMED 115959002 | Stereotactic radiosurgery (procedure) |c SNOMED 395096001 | Stereotactic radiotherapy (procedure) |c SNOMED 152198000 | Brachytherapy (procedure) |c SNOMED 399315003 | Radionuclide therapy (procedure) |c SNOMED 168524008 | Radiotherapy - intraoperative control (procedure) |c SNOMED 78080008 | Hyperthermia treatment of cancer (procedure) |c SNOMED 74964007 | Other (qualifier value) |c

Referencec # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#Reference
Description

reference construct used for comparison purposes

Schema representation
Meaning binding
(Equivalent-classes)
GENO 0000152 | reference |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has codeop
1 .. 1 Codec or Terminologyc
Restrictions None
Notes

sphn:hasCode allowed coding system: NCBI GenBank or other

Used in
(In the range of)
has referenceop

Reference Rangec # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#ReferenceRange
Description

interval of values that is deemed normal for a physiologic measurement in healthy individuals

Schema representation
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has upper limitop
0 .. 1 Quantityc
has lower limitop
0 .. 1 Quantityc
Restrictions None
Used in
(In the range of)
has reference rangeop

Respiratory Ratec # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#RespiratoryRate
Description

frequency at which the breathing occurs

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 86290005 | Respiratory rate (observable entity) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has quantityop
1 .. 1 Quantityc
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has data provider instituteop
1 .. 1 Data Provider Institutec
has determination datetimedp
0 .. 1 xsd:dateTimec
has administrative caseop
0 .. 1 Administrative Casec
has data determinationop
0 .. 1 Yes
Restrictions
has data determinationop / has method codeop : descendants of the given classes are not allowed

SNOMED 258104002 | Measured (qualifier value) |c SNOMED 258090004 | Calculated (qualifier value) |c SNOMED 87982008 | Manual (qualifier value) |c SNOMED 263760002 | Forced (qualifier value) |c

SPHN Conceptc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#SPHNConcept
Description

SPHN Concepts defined by the SPHN dataset

Children
(Sub-classes)
Allergy Episodec
Pharmaceutical Dose Formc
Administrative Genderc
Intentc
Locationc
Data Provider Institutec
Quantityc
Tumor Gradec
Genec
Civil Statusc
Simple Scorec
Gestational Age At Birthc
Tumor Specimenc
Data Filec
Respiratory Ratec
Unitc
Data Determinationc
Death Datec
Transcriptc
Drugc
Biobanksamplec
Lateralityc
Allergyc
Terminologyc
Variant Notationc
Lab Testc
Adverse Eventc
Proteinc
Body Mass Indexc
Measurement Methodc
Chromosomal Locationc
Organismc
Electrocardiogramc
Time Patternc
Value Setc
Body Surface Areac
Reference Rangec
Subject Pseudo Identifierc
Agec
Measurementc
Chromosomec
Medical Devicec
Lab Resultc
Body Sitec
Procedurec
Codec
Cardiac Indexc
Drug Prescriptionc
Access Device Presencec
Consentc
Data Releasec
Genetic Variationc
Substancec
Samplec
Referencec
Tumor Stagec
Death Statusc
TNM Classificationc
Variant Descriptorc
Drug Administration Eventc
Body Positionc
Genomic Positionc
Oncology Treatment Assessmentc
Problem Conditionc
Diagnosisc
Allergenc
Therapeutic Areac
Healthcare Encounterc
Care Handlingc
Administrative Casec
Birth Datec
Physiologic Statec
Used in
(In the range of)
has rankop
has fixation typeop
has calculation methodop
has resultop
has progression typeop
has methodop
has comparatorop
has specialty nameop
has consequencesop
has primary containerop
has coordinate conventionop
has outcomeop
has criteriaop

Samplec # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#Sample
Description

any material sample for testing, diagnostic, propagation, treatment or research purposes

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 123038009 | Specimen (specimen) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has body siteop
0 .. 1 Body Sitec
has material type codeop
0 .. * Yes
has fixation typeop
0 .. 1 Yes
has administrative caseop
0 .. 1 Administrative Casec
has identifierdp
0 .. * xsd:stringc
has collection datetimedp
1 .. 1 xsd:dateTimec
has primary containerop
0 .. 1 Yes
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has data provider instituteop
1 .. 1 Data Provider Institutec
Restrictions
has material type codeop : descendants of the given classes are allowed

SNOMED 123038009 | Specimen (specimen) |c

has fixation typeop :

Sample fixation typec

has primary containerop :

Sample primary containerc

Used in
(In the range of)
has sampleop

Simple Scorec # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#SimpleScore
Description

score given using a scoring system based on procedures that serve to classify e.g. health status, disease pattern or injury pattern and are used in medicine

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 782487009 | Assessment score (observable entity) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has valuedp
1 .. 1 Yes
has administrative caseop
0 .. 1 Administrative Casec
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has scoring system codeop
0 .. 1 Terminologyc or Codec
has data provider instituteop
1 .. 1 Data Provider Institutec
has scoring systemdp
0 .. 1 xsd:stringc
has assessment datetimedp
1 .. 1 xsd:dateTimec
Restrictions
has valuedp :

xsd:stringc

Notes

sphn:hasScoringSystemCode recommended values: 386554004 |Glasgow coma scale (assessment scale)|, 273481004 |Geriatric depression scale (assessment scale)|, 273617000 |Mini-mental state examination (assessment scale)|, 225908003 |Pain score (observable entity)|, 279101002 |Verbal rating scale (assessment scale)|, 273903006 |Visual analog scale (assessment scale)|, 273812009 |Simplified acute physiology scale II (assessment scale)|, 169895004 |Apgar score at 1 minute (observable entity)|, 169909004 |Apgar score at 5 minutes (observable entity)|, 169922007 |Apgar score at 10 minutes (observable entity)|, 459231000124102 | Sequential Organ Failure Assessment (assessment scale)|

Single Nucleotide Variationc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#SingleNucleotideVariation
Description

single nucleotide change in a DNA sequence at a specific location

Schema representation
Meaning binding
(Equivalent-classes)
SO 0001483 | SNV |c
Parents
Genetic Variationc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has chromosomal locationop
0 .. 1 Chromosomal Locationc
has alternate alleledp
1 .. 1 xsd:stringc
has genomic positionop
0 .. 1 Genomic Positionc
has reference alleledp
1 .. 1 xsd:stringc
Restrictions None

Subject Pseudo Identifierc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#SubjectPseudoIdentifier
Description

a pseudo code assigned as unique identifier to an individual by a data provider institute

Schema representation
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has data provider instituteop
1 .. 1 Data Provider Institutec
has identifierdp
1 .. 1 xsd:stringc
Restrictions None
Used in
(In the range of)
has subject pseudo identifierop

Substancec # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#Substance
Description

any matter of defined composition that has discrete existence, whose origin may be biological, mineral or chemical

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 105590001 | Substance (substance) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has generic namedp
0 .. 1 xsd:stringc
has quantityop
0 .. 1 Quantityc
has codeop
0 .. 1 Yes
Restrictions
has codeop :

SNOMED 105590001 | Substance (substance) |c Codec Terminologyc

Notes

sphn:hasCode allowed coding system: SNOMED CT, ATC, NCI Thesaurus or other

Used in
(In the range of)
has active ingredientop
has inactive ingredientop

TNM Classificationc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#TNMClassification
Description

classification of malignant tumor

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 399566009 | Tumor-node-metastasis (TNM) category (observable entity) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has assessment datetimedp
1 .. 1 xsd:dateTimec
has N suffixdp
0 .. 1 xsd:stringc
has T prefixdp
0 .. 1 xsd:stringc
has valuedp
1 .. 1 Yes
has administrative caseop
0 .. 1 Administrative Casec
has versiondp
0 .. 1 xsd:stringc
has M prefixdp
0 .. 1 xsd:stringc
has N prefixdp
0 .. 1 xsd:stringc
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has M suffixdp
0 .. 1 xsd:stringc
has T suffixdp
0 .. 1 xsd:stringc
has data provider instituteop
1 .. 1 Data Provider Institutec
Restrictions
has valuedp :

xsd:stringc

Terminologyc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#Terminology
Description

Terminology class for grouping external resources used in the SPHN project

Parents
SPHN Conceptc
Children
(Sub-classes)
sphn-geno:GENOc
SNOMED 138875005 | SNOMED CT Concept (SNOMED RT+CTV3) |c
sphn-so:SOc
icd-10-gm:ICD-10-GMc
sphn-hgnc:HGNCc
sphn-loinc:LOINCc
ucum:UCUMc
CHOP CHOP | CHOP |c
sphn-atc:ATCc
Used in
(In the range of)
has regularity codeop
has material type codeop
has reaction type codeop
has manifestation severity codeop
has morphology codeop
has format codeop
has allele origin codeop
has scoring system codeop
has method codeop
has topography codeop
has manifestation codeop
has severity codeop
has exposure route codeop
has type codeop
has reason to stop codeop
has zygosity codeop
has administration route codeop
has end cytoband codeop
has product codeop
has codeop
has status codeop
has start cytoband codeop
has qualitative result codeop
has verification status codeop
has certainty codeop
has relative temporality codeop

Therapeutic Areac # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#TherapeuticArea
Description

professional health care specialization

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 394658006 | Clinical specialty (qualifier value) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has specialty nameop
1 .. 1 Yes
Restrictions
has specialty nameop :

Therapeutic Area specialty namec

Used in
(In the range of)
has therapeutic areaop

Time Patternc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#TimePattern
Description

type of time period during which a treatment was given or an assessment was performed; this can be single time points or a continuous event

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 272103003 | Time patterns (qualifier value) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has type codeop
1 .. 1 Yes
Restrictions
has type codeop : descendants of the given classes are not allowed

SNOMED 255238004 | Continuous (qualifier value) |c SNOMED 7087005 | Intermittent (qualifier value) |c SNOMED 385432009 | Not applicable (qualifier value) |c

Used in
(In the range of)
has time patternop

Transcriptc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#Transcript
Description

RNA molecules that are made from a DNA template

Schema representation
Meaning binding
(Equivalent-classes)
SO 0000673 | transcript |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has proteinop
0 .. 1 Proteinc
has organismop
0 .. 1 Organismc
has codeop
1 .. 1 Codec or Terminologyc
Restrictions None
Notes

sphn:hasCode allowed coding system: Ensembl or other

Used in
(In the range of)
has transcriptop

Tumor Gradec # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#TumorGrade
Description

tumor cells and tumor tissue abnormality

Schema representation
Meaning binding
(Equivalent-classes)
LOINC 21858-6 | Grade Cancer |c
SNOMED 373372005 | Histological grade finding (finding) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has data provider instituteop
1 .. 1 Data Provider Institutec
has codeop
1 .. 1 Codec or Terminologyc
has assessment datetimedp
1 .. 1 xsd:dateTimec
has administrative caseop
0 .. 1 Administrative Casec
Restrictions None

Tumor Specimenc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#TumorSpecimen
Description

tumor specimen, volume and fixation method used

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 258435002 | Tumor tissue specimen (specimen) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has primary containerop
0 .. 1 Yes
has body siteop
0 .. 1 Body Sitec
has fixation typeop
0 .. 1 Yes
has tumor purityop
0 .. 1 Yes
has data provider instituteop
1 .. 1 Data Provider Institutec
has identifierdp
0 .. * xsd:stringc
has collection datetimedp
1 .. 1 xsd:dateTimec
has material type codeop
0 .. * Yes
has administrative caseop
0 .. 1 Administrative Casec
Restrictions
has primary containerop :

Tumor Specimen primary containerc

has fixation typeop :

Tumor Specimen fixation typec

has tumor purityop / has unitop / has codeop :

ucum:percentc

has material type codeop : descendants of the given classes are allowed

SNOMED 123038009 | Specimen (specimen) |c

Tumor Stagec # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#TumorStage
Description

growth extent of the tumor and how far the tumor has spread

Schema representation
Meaning binding
(Equivalent-classes)
LOINC 21908-9 | Stage group.clinical Cancer |c
SNOMED 254292007 | Tumor staging (tumor staging) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has subject pseudo identifierop
1 .. 1 Subject Pseudo Identifierc
has codeop
1 .. 1 Codec or Terminologyc
has assessment datetimedp
1 .. 1 xsd:dateTimec
has data provider instituteop
1 .. 1 Data Provider Institutec
has administrative caseop
0 .. 1 Administrative Casec
Restrictions None

Unitc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#Unit
Description

unit of measurement

Schema representation
Meaning binding
(Equivalent-classes)
SNOMED 767524001 | Unit of measure (qualifier value) |c
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has codeop
1 .. 1 Yes
Restrictions
has codeop :

ucum:UCUMc

Used in
(In the range of)
has unitop

Variant Descriptorc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#VariantDescriptor
Description

human-readable description of the variant

Schema representation
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has type codeop
0 .. 1 Yes
has data provider instituteop
1 .. * Data Provider Institutec
has codeop
0 .. 1 Codec or Terminologyc
has notationop
0 .. 1 Variant Notationc
has zygosity codeop
0 .. 1 Yes
has administrative caseop
0 .. * Administrative Casec
has allele origin codeop
0 .. 1 Yes
has geneop
0 .. 1 Genec
has subject pseudo identifierop
1 .. * Subject Pseudo Identifierc
has genetic variationop
0 .. 1 Genetic Variationc
Restrictions
has type codeop :

SO 0001059 | sequence_alteration |c

has zygosity codeop :

GENO 0000133 | zygosity |c

has allele origin codeop :

GENO 0000877 | allele origin |c

Notes

sphn:hasCode allowed coding system: ClinVar, RefSNP or other

Variant Notationc # Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#VariantNotation
Description

description of the variant using a specific nomenclature

Schema representation
Parents
SPHN Conceptc
Property
(In the domain of)
Cardinality Class or Datatype Restriction
has valuedp
1 .. 1 Yes
has coding system and versiondp
1 .. 1 xsd:stringc
Restrictions
has valuedp :

xsd:stringc

Used in
(In the range of)
has notationop

Deprecated Classes

Biosamplec # Deprecated Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#Biosample
Description

any material sample taken from a biological entity for testing, diagnostic, propagation, treatment or research purposes

Parents
Deprecatedc

Catheterc # Deprecated Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#Catheter
Description

medical device composed of a tube of varying size and length

Parents
Deprecatedc

Central Venous Pressurec # Deprecated Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#CentralVenousPressure
Description

central venous pressure measured in the venae cavae

Parents
Deprecatedc

Deprecatedc # Deprecated Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#Deprecated
Description

Deprecated classes of SPHN that existed in the previous version

Children
(Sub-classes)
Catheterc
Central Venous Pressurec
Biosamplec
Systemic Arterial Blood Pressurec

Systemic Arterial Blood Pressurec # Deprecated Classes

URI https://biomedit.ch/rdf/sphn-ontology/sphn#SystemicArterialBloodPressure
Description

arterial blood pressure in systemic circulation

Parents
Deprecatedc

Valuesets

Adverse Event consequencesc # Valuesets

URI https://biomedit.ch/rdf/sphn-ontology/sphn#AdverseEvent_consequences
Description

consequences of the concept

Parents
Value Setc
Value set members
(Individuals)
Life-threatening
Permanent damage or disability
None of the consequences mentioned
Hospitalisation or prolongation
Death
Congenital abnormality
Temporarily serious impact / medically important

Adverse Event outcomec # Valuesets

URI https://biomedit.ch/rdf/sphn-ontology/sphn#AdverseEvent_outcome
Description

result or effect of an action, situation, or event of the concept

Parents
Value Setc
Value set members
(Individuals)
Recovering with sequelae
Not recovered
Recovered
Recovering
Fatal

Body Surface Area calculation methodc # Valuesets

URI https://biomedit.ch/rdf/sphn-ontology/sphn#BodySurfaceArea_calculationMethod
Description

formula or method for calculating the concept

Parents
Value Setc
Value set members
(Individuals)
mosteller
du bois
other

Comparatorc # Valuesets

URI https://biomedit.ch/rdf/sphn-ontology/sphn#Comparator
Description

qualifier describing whether the value is the precise one or not

Parents
Value Setc
Value set members
(Individuals)
>
<=
>=
<

Diagnostic Radiologic Examination methodc # Valuesets

URI https://biomedit.ch/rdf/sphn-ontology/sphn#DiagnosticRadiologicExamination_method
Description

method used for the concept

Parents
Value Setc
Value set members
(Individuals)
CT
X-ray
PET CT
PET
MRI
SPECT

FOPH Diagnosis rankc # Valuesets

URI https://biomedit.ch/rdf/sphn-ontology/sphn#FOPHDiagnosis_rank
Description

specifies the level of the concept

Parents
Value Setc
Value set members
(Individuals)
complementary
secondary
principal

FOPH Procedure rankc # Valuesets

URI https://biomedit.ch/rdf/sphn-ontology/sphn#FOPHProcedure_rank
Description

specifies the level of the concept

Parents
Value Setc
Value set members
(Individuals)
supplementary
principal

Genomic Position coordinate conventionc # Valuesets

URI https://biomedit.ch/rdf/sphn-ontology/sphn#GenomicPosition_coordinateConvention
Description

convention used for the interpretation of coordinates used in the concept

Parents
Value Setc
Value set members
(Individuals)
Inter-residue coordinates
Residue coordinates

Oncology Treatment Assessment criteriac # Valuesets

URI https://biomedit.ch/rdf/sphn-ontology/sphn#OncologyTreatmentAssessment_criteria
Description

criteria used for the concept

Parents
Value Setc
Value set members
(Individuals)
RECIST 1.1
RECIST 1.0
traceable author statement

Oncology Treatment Assessment progression typec # Valuesets

URI https://biomedit.ch/rdf/sphn-ontology/sphn#OncologyTreatmentAssessment_progressionType
Description

type of progression

Parents
Value Setc
Value set members
(Individuals)
metastatic
regional
biochemical
localized

Oncology Treatment Assessment resultc # Valuesets

URI https://biomedit.ch/rdf/sphn-ontology/sphn#OncologyTreatmentAssessment_result
Description

result associated to the concept

Parents
Value Setc
Value set members
(Individuals)
stable disease
progressive disease
partial response
complete response

Sample fixation typec # Valuesets

URI https://biomedit.ch/rdf/sphn-ontology/sphn#Sample_fixationType
Description

fixation or stabilization type

Parents
Value Setc
Value set members
(Individuals)
other
Allprotect ® tissue reagent
PAXgene tissue
Vacuum technology stabilization
Neutral buffered formalin
Nonaldehyde based without acetic acid
Aldehyde based
Nonaldehyde with acetic acid
Alcohol based
Heat stabilization
Nonbuffered formalin
RNA Later
Snap freezing
Optimum cutting temperature medium

Sample primary containerc # Valuesets

URI https://biomedit.ch/rdf/sphn-ontology/sphn#Sample_primaryContainer
Description

type of primary container of the concept

Parents
Value Setc
Value set members
(Individuals)
Glass
Cell Preparation Tube® heparin
Sodium heparin
Cell Preparation Tube® citrate
Hirudin
S8820 protease inhibitor tablets or equivalent
Polypropylene tube sterile
RNA Later
Lithium heparin and rubber plug
Sodium citrate
other
Chemical additives / stabilizers
Non-aldehyde-based stabilizer for cell-free nucleic acids
PAXgene® bone marrow RNA
Sodium EDTA
Stool collection container with DNA stabilizer
PAXgene® blood DNA
Aldehyde-based stabilizer for CTCs
Physical filtration system
Sodium fluoride/potassium oxalate
Lithium heparin
Protease inhibitors
Acid citrate dextrose
Tempus® tube
Potassium EDTA
PAXgene® blood RNA+
Oragene collection container or equivalent
Polyethylene tube sterile
Serum separator tube with clot activator
Citrate phosphate dextrose
Trace elements tube
Lithium heparin and gel
Serum tube without clot activator
EDTA and gel

Therapeutic Area specialty namec # Valuesets

URI https://biomedit.ch/rdf/sphn-ontology/sphn#TherapeuticArea_specialtyName
Description

name of professional health care specialization

Parents
Value Setc
Value set members
(Individuals)
Oral and maxillofacial surgery
Thoracic surgery
Clinical Psychology
Radiology
General internal medicine
Chiropractic specialist
Physical medicine and rehabilitation
Neurosurgery
Hand surgery
Gynaecology and obstetrics
Psychiatry and psychotherapy
Occupational medicine
Forensic medicine
Pneumology
Allergology and clinical immunology
Medical oncology
Rheumatology
Internal medicine
Clinical pharmacology and toxicology
Vascular surgery
Pharmaceutical medicine
Surgery
Paediatrics
Health Psychology
Visceral medicine
Gastroenterology
Orthopaedic surgery and traumatology of the locomotor apparatus
Psychotherapy
Anaesthesiology
Cardiology
Angiology
other
Endocrinology and Diabetology
Periodontics
Addiction medicine
Child and adolescent psychiatry and psychotherapy
Pathology
Cardiac and thoracic vascular surgery
Geriatric medicine
Community pharmacy
Neuropsychology
Nephrology
Intensive care medicine
Tropical and travel medicine
Orthodontics
Urology
Child and adolescent psychology
Nuclear medicine
Reconstructive dentistry
Dermatology and venereology
General medicine
Medical genetics
Ophthalmology
Prevention and public health
Haematology
Hospital pharmacy
Oral surgery
Infectology
Plastic, reconstructive and aesthetic surgery
Paediatric surgery
General medical practitioner
Radio-oncology and radiotherapy
Neurology
Otorhinolaryngology

Tumor Specimen fixation typec # Valuesets

URI https://biomedit.ch/rdf/sphn-ontology/sphn#TumorSpecimen_fixationType
Description

fixation or stabilization type

Parents
Value Setc
Value set members
(Individuals)
Optimum cutting temperature medium
Allprotect ® tissue reagent
PAXgene tissue
Vacuum technology stabilization
Neutral buffered formalin
Nonaldehyde based without acetic acid
Nonaldehyde with acetic acid
Alcohol based
Heat stabilization
Nonbuffered formalin
RNA Later
Snap freezing
other
Aldehyde based

Tumor Specimen primary containerc # Valuesets

URI https://biomedit.ch/rdf/sphn-ontology/sphn#TumorSpecimen_primaryContainer
Description

type of primary container of the concept

Parents
Value Setc
Value set members
(Individuals)
Lithium heparin and gel
Glass
Cell Preparation Tube® heparin
Sodium heparin
Cell Preparation Tube® citrate
Potassium EDTA
S8820 protease inhibitor tablets or equivalent
Citrate phosphate dextrose
RNA Later
Lithium heparin and rubber plug
Serum tube without clot activator
EDTA and gel
PAXgene® bone marrow RNA
Sodium EDTA
Stool collection container with DNA stabilizer
Hirudin
Polypropylene tube sterile
Sodium fluoride/potassium oxalate
Lithium heparin
Protease inhibitors
Acid citrate dextrose
Tempus® tube
Sodium citrate
PAXgene® blood RNA+
other
Chemical additives / stabilizers
Non-aldehyde-based stabilizer for cell-free nucleic acids
Oragene collection container or equivalent
Polyethylene tube sterile
PAXgene® blood DNA
Aldehyde-based stabilizer for CTCs
Serum separator tube with clot activator
Physical filtration system
Trace elements tube

Value Setc # Valuesets

URI https://biomedit.ch/rdf/sphn-ontology/sphn#ValueSet
Description

List of value sets provided by SPHN

Parents
SPHN Conceptc
Children
(Sub-classes)
Comparatorc
Oncology Treatment Assessment progression typec
FOPH Diagnosis rankc
Therapeutic Area specialty namec
Adverse Event outcomec
Oncology Treatment Assessment criteriac
Oncology Treatment Assessment resultc
FOPH Procedure rankc
Sample primary containerc
Diagnostic Radiologic Examination methodc
Tumor Specimen fixation typec
Body Surface Area calculation methodc
Tumor Specimen primary containerc
Adverse Event consequencesc
Sample fixation typec
Genomic Position coordinate conventionc

Object Properties

SPHN attribute objectop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#SPHNAttributeObject
Description

SPHN object attribute defined by the dataset

has active ingredientop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasActiveIngredient
Description

pharmaceutically active component of the concept

Super-properties SPHN attribute objectop
Domain(s) Drugc
Range Substancec

has administration route codeop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasAdministrationRouteCode
Description

code, name, coding system and version describing the route of administration

Super-properties has codeop
Domain(s) Drug Prescriptionc Drug Administration Eventc
Range Codec Terminologyc

has administrative caseop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasAdministrativeCase
Description

link to an interaction between an individual and healthcare provider(s) via an administrative case identifier for the purpose of providing healthcare service(s) or assessing the health status of an individual

Super-properties SPHN attribute objectop
Domain(s) Body Surface Areac Electrocardiographic Procedurec Oncology Treatment Assessmentc ICD-O Diagnosisc FOPH Procedurec Healthcare Encounterc Lab Resultc Measurementc Access Device Presencec Body Temperaturec Body Positionc Samplec Body Heightc Procedurec Blood Pressurec Cardiac Indexc Simple Scorec Diagnostic Radiologic Examinationc Tumor Gradec Circumference Measurec Cardiac Outputc TNM Classificationc Nursing Diagnosisc Body Mass Indexc Adverse Eventc Biobanksamplec Variant Descriptorc Gestational Age At Birthc Body Weightc Radiotherapy Procedurec Respiratory Ratec Heart Ratec FOPH Diagnosisc Problem Conditionc Oxygen Saturationc Drug Prescriptionc Allergy Episodec Drug Administration Eventc Diagnosisc Tumor Specimenc Inhaled Oxygen Concentrationc Tumor Stagec
Range Administrative Casec

has allele origin codeop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasAlleleOriginCode
Description

code, name, coding system and version describing the origin of the allele decribed by the concept

Super-properties has codeop
Domain(s) Variant Descriptorc
Range Terminologyc Codec

has allergenop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasAllergen
Description

any substance, product or physical force producing immediate hypersensitivity responsible for the concept

Super-properties SPHN attribute objectop
Domain(s) Allergyc Allergy Episodec
Range Allergenc

has body siteop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasBodySite
Description

body site where the concept was measured, performed or collected

Super-properties SPHN attribute objectop
Domain(s) Samplec Circumference Measurec Tumor Specimenc Electrocardiographic Procedurec Body Temperaturec Oxygen Saturationc Procedurec Blood Pressurec Diagnostic Radiologic Examinationc FOPH Procedurec Radiotherapy Procedurec Heart Ratec
Range Body Sitec

has calculation methodop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasCalculationMethod
Description

formula or method for calculating the concept

Super-properties SPHN attribute objectop
Domain(s) Body Surface Areac
Range SPHN Conceptc

has care handlingop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasCareHandling
Description

describes the relationship between the patient and care provider institute

Super-properties SPHN attribute objectop
Domain(s) Administrative Casec
Range Care Handlingc

has certainty codeop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasCertaintyCode
Description

code, name, coding system and version describing the degree of certainty (from a clinical point of view) that the specific substance triggered the concept

Super-properties has codeop
Domain(s) Allergy Episodec
Range Codec Terminologyc

has chromosomal locationop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasChromosomalLocation
Description

chromosomal location of the concept

Super-properties SPHN attribute objectop
Domain(s) Single Nucleotide Variationc Genetic Variationc
Range Chromosomal Locationc

has chromosomeop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasChromosome
Description

chromosome associated to the concept

Super-properties SPHN attribute objectop
Domain(s) Chromosomal Locationc
Range Chromosomec

has codeop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasCode
Description

code, name, coding system and version describing the concept

Super-properties SPHN attribute objectop
Domain(s) Organismc Death Statusc Proteinc Pharmaceutical Dose Formc FOPH Diagnosisc Civil Statusc Lateralityc Referencec Physiologic Statec Genec Diagnostic Radiologic Examinationc Problem Conditionc Tumor Gradec Nursing Diagnosisc Adverse Eventc Diagnosisc Variant Descriptorc Data Provider Institutec Radiotherapy Procedurec Chromosomec Tumor Stagec Body Sitec Measurement Methodc Unitc Transcriptc Body Positionc Lab Testc Procedurec Electrocardiographic Procedurec Allergenc FOPH Procedurec Substancec Administrative Genderc Intentc
Range Codec Terminologyc

has comparatorop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasComparator
Description

qualifier describing imprecise values

Super-properties SPHN attribute objectop
Domain(s) Quantityc Birth Datec
Range SPHN Conceptc

has consequencesop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasConsequences
Description

consequences of the concept

Super-properties SPHN attribute objectop
Domain(s) Adverse Eventc
Range SPHN Conceptc

has coordinate conventionop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasCoordinateConvention
Description

convention used for the interpretation of coordinates used in the concept

Super-properties SPHN attribute objectop
Domain(s) Genomic Positionc
Range SPHN Conceptc

has criteriaop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasCriteria
Description

criteria used for the concept

Super-properties SPHN attribute objectop
Domain(s) Oncology Treatment Assessmentc
Range SPHN Conceptc

has current locationop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasCurrentLocation
Description

physical location where the individual received medical care

Super-properties has locationop
Domain(s) Healthcare Encounterc
Range Locationc

has data determinationop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasDataDetermination
Description

indicates whether the value was measured, calculated or set as a parameter of the ventilator

Super-properties SPHN attribute objectop
Domain(s) Inhaled Oxygen Concentrationc Respiratory Ratec
Range Data Determinationc

has data fileop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasDataFile
Description

data file associated to the concept

Super-properties SPHN attribute objectop
Domain(s) Electrocardiogramc
Range Data Filec

has data provider instituteop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasDataProviderInstitute
Description

link to the unique business identification number (UID) of the healthcare institute providing the data

Super-properties SPHN attribute objectop
Domain(s) Body Heightc FOPH Diagnosisc Cardiac Indexc Diagnostic Radiologic Examinationc Tumor Gradec Circumference Measurec Cardiac Outputc Allergy Episodec Nursing Diagnosisc Drug Administration Eventc Body Mass Indexc Adverse Eventc Diagnosisc Locationc Biobanksamplec Variant Descriptorc Radiotherapy Procedurec Respiratory Ratec Heart Ratec Subject Pseudo Identifierc Problem Conditionc Oxygen Saturationc Drug Prescriptionc Administrative Casec Body Positionc Tumor Specimenc Inhaled Oxygen Concentrationc Procedurec Blood Pressurec Tumor Stagec Body Surface Areac Electrocardiographic Procedurec Simple Scorec Oncology Treatment Assessmentc ICD-O Diagnosisc FOPH Procedurec Healthcare Encounterc TNM Classificationc Lab Resultc Measurementc Access Device Presencec Body Temperaturec Data Filec Allergyc Gestational Age At Birthc Body Weightc Consentc Samplec
Range Data Provider Institutec

has death dateop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasDeathDate
Description

datetime of death for the individual

Super-properties SPHN attribute objectop
Domain(s) Death Statusc
Range Death Datec

has diastolic pressureop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasDiastolicPressure
Description

measured diastolic pressure value and unit

Super-properties has quantityop
Domain(s) Blood Pressurec
Range Quantityc

has discharge locationop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasDischargeLocation
Description

location where the individual went to when leaving the healthcare provider institute, e.g. nursing home

Super-properties has locationop
Domain(s) Administrative Casec
Range Locationc

has drugop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasDrug
Description

any substance with the intent to prevent, diagnose, treat, or relieve symptoms of a disease or abnormal condition used in or causing the concept

Super-properties SPHN attribute objectop
Domain(s) Drug Prescriptionc Drug Administration Eventc
Range Drugc

has drug quantityop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasDrugQuantity
Description

quantity of a drug of the concept

Super-properties has quantityop
Domain(s) Drug Prescriptionc Drug Administration Eventc
Range Quantityc

has durationop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasDuration
Description

duration of an event

Super-properties has quantityop
Domain(s) Drug Administration Eventc
Range Quantityc

has end cytoband codeop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasEndCytobandCode
Description

end cytoband of the concept

Super-properties has codeop
Domain(s) Chromosomal Locationc
Range Codec Terminologyc

has exposure durationop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasExposureDuration
Description

duration of the exposure

Super-properties has durationop
Domain(s) Allergy Episodec
Range Quantityc

has exposure route codeop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasExposureRouteCode
Description

code, name, coding system and version describing how the individual was exposed to the substance

Super-properties has codeop
Domain(s) Allergy Episodec
Range Codec Terminologyc

has fixation typeop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasFixationType
Description

fixation or stabilization type

Super-properties SPHN attribute objectop
Domain(s) Samplec Tumor Specimenc
Range SPHN Conceptc

has format codeop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasFormatCode
Description

code, name, coding system and version describing the format of the concept

Super-properties has codeop
Domain(s) Data Filec
Range Terminologyc Codec

has fractions numberop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasFractionsNumber
Description

number of fractions applied during an event

Super-properties has quantityop
Domain(s) Radiotherapy Procedurec
Range Quantityc

has frequencyop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasFrequency
Description

number of events per unit of time

Super-properties has quantityop
Domain(s) Drug Prescriptionc
Range Quantityc

has geneop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasGene
Description

specific gene(s) context where the concept occurs

Super-properties SPHN attribute objectop
Domain(s) Variant Descriptorc
Range Genec

has genetic variationop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasGeneticVariation
Description

concept described by its position and sequence change

Super-properties SPHN attribute objectop
Domain(s) Variant Descriptorc
Range Genetic Variationc

has genomic positionop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasGenomicPosition
Description

genomic position of the concept

Super-properties SPHN attribute objectop
Domain(s) Genetic Variationc Single Nucleotide Variationc
Range Genomic Positionc

has inactive ingredientop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasInactiveIngredient
Description

inert ingredients or excipients, and generally have no pharmacological effect of the concept

Super-properties SPHN attribute objectop
Domain(s) Drugc
Range Substancec

has indication to startop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasIndicationToStart
Description

indication to start the concept

Super-properties SPHN attribute objectop
Domain(s) Drug Prescriptionc
Range Diagnosisc Intentc

has insertion pointop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasInsertionPoint
Description

point of insertion

Super-properties has body siteop
Domain(s) Access Device Presencec
Range Body Sitec

has instrumentop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasInstrument
Description

instrument used for the concept

Super-properties SPHN attribute objectop
Domain(s) Lab Testc
Range Lab Analyzerc

has intentop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasIntent
Description

intention for the concept

Super-properties SPHN attribute objectop
Domain(s) Electrocardiographic Procedurec Drug Prescriptionc Procedurec Diagnostic Radiologic Examinationc FOPH Procedurec Radiotherapy Procedurec
Range Intentc

has lab testop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasLabTest
Description

lab test information associated to the concept

Super-properties SPHN attribute objectop
Domain(s) Lab Resultc
Range Lab Testc

has lateralityop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasLaterality
Description

localization with respect to the side of the body

Super-properties SPHN attribute objectop
Domain(s) Body Sitec
Range Lateralityc

has locationop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasLocation
Description

statement about a physical location

Super-properties SPHN attribute objectop
Range Locationc

has lower limitop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasLowerLimit
Description

lowest value of the concept

Super-properties has quantityop
Domain(s) Reference Rangec
Range Quantityc

has manifestation body siteop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasManifestationBodySite
Description

location in the body where the manifestation occurs (also referred to as manifestation location)

Super-properties has body siteop
Domain(s) Allergy Episodec
Range Body Sitec

has manifestation codeop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasManifestationCode
Description

code, name, coding system and version describing the clinical symptom and/or sign that occurred during the specific concept

Super-properties has codeop
Domain(s) Allergy Episodec
Range Codec Terminologyc

has manifestation durationop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasManifestationDuration
Description

duration of manifestation

Super-properties has durationop
Domain(s) Allergy Episodec
Range Quantityc

has manifestation severity codeop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasManifestationSeverityCode
Description

code, name, coding system and version describing the severity of the manifestation

Super-properties has codeop
Domain(s) Allergy Episodec
Range Terminologyc Codec

has manufactured dose formop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasManufacturedDoseForm
Description

dose form presented in the manufactured item, e.g. powder

Super-properties SPHN attribute objectop
Domain(s) Drugc
Range Pharmaceutical Dose Formc

has material type codeop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasMaterialTypeCode
Description

code, name, coding system and version describing the material type of the concept

Super-properties has codeop
Domain(s) Samplec Tumor Specimenc
Range Terminologyc Codec

has mean pressureop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasMeanPressure
Description

measured average pressure value and unit

Super-properties has quantityop
Domain(s) Blood Pressurec
Range Quantityc

has measurement methodop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasMeasurementMethod
Description

measurement method of the concept

Super-properties SPHN attribute objectop
Domain(s) Blood Pressurec Heart Ratec Oxygen Saturationc
Range Measurement Methodc

has medical deviceop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasMedicalDevice
Description

product intended for medical use when the main effect is not achieved by a medicinal product; medical devices include, but are not limited to, implants, instruments, devices, in vitro diagnostics, used in the concept

Super-properties SPHN attribute objectop
Domain(s) Access Device Presencec
Range Medical Devicec

has methodop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasMethod
Description

method used for the concept

Super-properties SPHN attribute objectop
Domain(s) Diagnostic Radiologic Examinationc
Range SPHN Conceptc

has method codeop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasMethodCode
Description

code, name, coding system and version describing the method used for the assessment of the concept

Super-properties has codeop
Domain(s) Oncology Treatment Assessmentc Data Determinationc Cardiac Indexc Cardiac Outputc
Range Terminologyc Codec

has morphology codeop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasMorphologyCode
Description

code, name, coding system and version describing the characteristics of the tumor itself, including its cell type and biological activity; the code is composed of four digits that indicate the cell type or histology and one digit that indicates the behaviour

Super-properties has codeop
Domain(s) ICD-O Diagnosisc
Range Terminologyc Codec

has notationop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasNotation
Description

description of the concept using a specific nomenclature or syntax

Super-properties SPHN attribute objectop
Domain(s) Variant Descriptorc
Range Variant Notationc

has number of leadsop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasNumberOfLeads
Description

number of leads used in the concept

Super-properties has quantityop
Domain(s) Electrocardiographic Procedurec
Range Quantityc

has organismop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasOrganism
Description

organism associated to the concept

Super-properties SPHN attribute objectop
Domain(s) Proteinc Genec Transcriptc
Range Organismc

has origin locationop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasOriginLocation
Description

physical location where the individual came from

Super-properties has locationop
Domain(s) Administrative Casec Healthcare Encounterc
Range Locationc

has outcomeop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasOutcome
Description

result or effect of an action, situation, or event of the concept

Super-properties SPHN attribute objectop
Domain(s) Adverse Eventc
Range SPHN Conceptc

has outputop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasOutput
Description

output of the concept

Super-properties SPHN attribute objectop
Domain(s) Electrocardiographic Procedurec
Range Electrocardiogramc

has oxygen equipmentop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasOxygenEquipment
Description

type of device used for oxygen therapy, e.g. nasal cannula, Venturi mask

Super-properties SPHN attribute objectop
Domain(s) Inhaled Oxygen Concentrationc
Range Medical Devicec

has oxygen flow rateop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasOxygenFlowRate
Description

quantity and duration of oxygen flow rate administration

Super-properties SPHN attribute objectop
Domain(s) Inhaled Oxygen Concentrationc
Range Drug Administration Eventc

has physiologic stateop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasPhysiologicState
Description

physiologic state of the individual

Super-properties SPHN attribute objectop
Domain(s) Electrocardiographic Procedurec Heart Ratec
Range Physiologic Statec

has primary containerop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasPrimaryContainer
Description

type of primary container of the concept

Super-properties SPHN attribute objectop
Domain(s) Tumor Specimenc Samplec
Range SPHN Conceptc

has product codeop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasProductCode
Description

code, name, coding system and version describing the product of the concept

Super-properties has codeop
Domain(s) Drugc Lab Analyzerc Medical Devicec
Range Codec Terminologyc

has progression body siteop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasProgressionBodySite
Description

body site where the progression was observed

Super-properties has body siteop
Domain(s) Oncology Treatment Assessmentc
Range Body Sitec

has progression typeop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasProgressionType
Description

type of progression

Super-properties SPHN attribute objectop
Domain(s) Oncology Treatment Assessmentc
Range SPHN Conceptc

has proteinop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasProtein
Description

protein product of the concept

Super-properties SPHN attribute objectop
Domain(s) Transcriptc Genec
Range Proteinc

has qualitative result codeop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasQualitativeResultCode
Description

code, name, coding system and version describing the qualitative result of the concept

Super-properties has codeop
Domain(s) Lab Resultc
Range Codec Terminologyc

has quantitative resultop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasQuantitativeResult
Description

value and unit of the quantitative result of the concept

Super-properties has quantityop
Domain(s) Lab Resultc
Range Quantityc

has quantityop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasQuantity
Description

value and unit of the concept

Super-properties SPHN attribute objectop
Domain(s) Respiratory Ratec Heart Ratec Agec Circumference Measurec Oxygen Saturationc Inhaled Oxygen Concentrationc Body Surface Areac Measurementc Body Temperaturec Body Heightc Cardiac Indexc Cardiac Outputc Substancec Body Mass Indexc Gestational Age At Birthc Body Weightc
Range Quantityc

has radiation quantityop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasRadiationQuantity
Description

amount of radiation (value and unit) delivered or applied

Super-properties has quantityop
Domain(s) Radiotherapy Procedurec Diagnostic Radiologic Examinationc
Range Quantityc

has rankop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasRank
Description

specifies the level of the concept

Super-properties SPHN attribute objectop
Domain(s) FOPH Procedurec FOPH Diagnosisc
Range SPHN Conceptc

has reaction type codeop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasReactionTypeCode
Description

code, name, coding system and version describing the type of reaction observed for the concept

Super-properties has codeop
Domain(s) Allergyc
Range Terminologyc Codec

has reason to stop codeop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasReasonToStopCode
Description

code, name, coding system and version indicating the reason to stop the concept

Super-properties has codeop
Domain(s) Drug Administration Eventc
Range Codec Terminologyc

has referenceop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasReference
Description

reference used to define the coordinates of the concept

Super-properties SPHN attribute objectop
Domain(s) Genomic Positionc
Range Referencec

has reference rangeop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasReferenceRange
Description

normal range of the concept

Super-properties SPHN attribute objectop
Domain(s) Lab Resultc
Range Reference Rangec

has regularity codeop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasRegularityCode
Description

code, name, coding system and version describing the regular or irregular state of the heart rate

Super-properties has codeop
Domain(s) Heart Ratec
Range Terminologyc Codec

has relative temporality codeop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasRelativeTemporalityCode
Description

code, name, coding system and version describing when the problem was reported in relation to the treatment pathway, e.g. on admission, intraoperative, post-radiation

Super-properties has codeop
Domain(s) Problem Conditionc
Range Codec Terminologyc

has resting pointop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasRestingPoint
Description

point of resting

Super-properties has body siteop
Domain(s) Access Device Presencec
Range Body Sitec

has resultop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasResult
Description

result associated to the concept

Super-properties SPHN attribute objectop
Domain(s) Oncology Treatment Assessmentc
Range SPHN Conceptc

has sampleop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasSample
Description

any material sample for testing, diagnostic, propagation, treatment or research purposes associated to the concept

Super-properties SPHN attribute objectop
Domain(s) Biobanksamplec Lab Resultc
Range Samplec

has scoring system codeop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasScoringSystemCode
Description

code, name, coding system and version describing the scoring system

Super-properties has codeop
Domain(s) Simple Scorec
Range Terminologyc Codec

has severity codeop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasSeverityCode
Description

code, name, coding system and version describing the severity of the concept

Super-properties has codeop
Domain(s) Adverse Eventc Allergyc
Range Codec Terminologyc

has specialty nameop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasSpecialtyName
Description

name of professional health care specialization

Super-properties SPHN attribute objectop
Domain(s) Therapeutic Areac
Range SPHN Conceptc

has start cytoband codeop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasStartCytobandCode
Description

start cytoband of the concept

Super-properties has codeop
Domain(s) Chromosomal Locationc
Range Codec Terminologyc

has status codeop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasStatusCode
Description

code, name, coding system and version describing the status of the concept

Super-properties has codeop
Domain(s) Consentc
Range Codec Terminologyc

has subject ageop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasSubjectAge
Description

age of the individual at the time of the event

Super-properties SPHN attribute objectop
Domain(s) Nursing Diagnosisc FOPH Diagnosisc Diagnosisc ICD-O Diagnosisc
Range Agec

has subject pseudo identifierop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasSubjectPseudoIdentifier
Description

link to a pseudo code assigned as unique identifier to an individual by a data provider institute

Super-properties SPHN attribute objectop
Domain(s) Problem Conditionc Tumor Gradec Circumference Measurec Allergy Episodec Nursing Diagnosisc Drug Administration Eventc Body Mass Indexc Adverse Eventc Diagnosisc Tumor Specimenc Biobanksamplec Respiratory Ratec Tumor Stagec Electrocardiographic Procedurec ICD-O Diagnosisc Agec Lab Resultc Body Temperaturec Oxygen Saturationc Drug Prescriptionc Administrative Casec Body Positionc Inhaled Oxygen Concentrationc Procedurec Blood Pressurec Body Surface Areac Cardiac Indexc Simple Scorec Oncology Treatment Assessmentc Diagnostic Radiologic Examinationc FOPH Procedurec Healthcare Encounterc Cardiac Outputc Birth Datec TNM Classificationc Measurementc Access Device Presencec Administrative Genderc Death Datec Data Filec Variant Descriptorc Allergyc Gestational Age At Birthc Body Weightc Death Statusc Radiotherapy Procedurec Consentc Heart Ratec Samplec Body Heightc FOPH Diagnosisc Civil Statusc
Range Subject Pseudo Identifierc

has systolic pressureop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasSystolicPressure
Description

measured systolic pressure value and unit

Super-properties has quantityop
Domain(s) Blood Pressurec
Range Quantityc

has target locationop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasTargetLocation
Description

physical location where the individual went to

Super-properties has locationop
Domain(s) Healthcare Encounterc
Range Locationc

has test kitop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasTestKit
Description

test kit used for the concept

Super-properties SPHN attribute objectop
Domain(s) Lab Testc
Range Lab Analyzerc

has therapeutic areaop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasTherapeuticArea
Description

type of care provided

Super-properties SPHN attribute objectop
Domain(s) Healthcare Encounterc
Range Therapeutic Areac

has time patternop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasTimePattern
Description

type of time period during which a treatment was given or an assessment was performed

Super-properties SPHN attribute objectop
Domain(s) Drug Administration Eventc Drug Prescriptionc
Range Time Patternc

has topography codeop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasTopographyCode
Description

code, name, coding system and version of the topography code that describes the anatomical site of origin of the neoplasm

Super-properties has codeop
Domain(s) ICD-O Diagnosisc
Range Terminologyc Codec

has transcriptop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasTranscript
Description

RNA product of the concept

Super-properties SPHN attribute objectop
Domain(s) Genec
Range Transcriptc

has tumor purityop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasTumorPurity
Description

percentage of cancer cells in the sample

Super-properties has quantityop
Domain(s) Tumor Specimenc
Range Quantityc

has type codeop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasTypeCode
Description

code, name, coding system and version describing the type of the concept

Super-properties has codeop
Domain(s) Variant Descriptorc Consentc Care Handlingc Medical Devicec Locationc Lab Analyzerc Time Patternc
Range Codec Terminologyc

has unitop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasUnit
Description

unit of the amount, e.g. mL, mg, min

Super-properties SPHN attribute objectop
Domain(s) Quantityc
Range Unitc

has upper limitop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasUpperLimit
Description

top value of the concept

Super-properties has quantityop
Domain(s) Reference Rangec
Range Quantityc

has verification status codeop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasVerificationStatusCode
Description

code, name, coding system and version of the verification status of the concept

Super-properties has codeop
Domain(s) Allergyc
Range Codec Terminologyc

has zygosity codeop # OPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasZygosityCode
Description

code, name, coding system and version describing the allelic state of the concept

Super-properties has codeop
Domain(s) Variant Descriptorc
Range Codec Terminologyc

Datatype Properties

SPHN attribute datatypedp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#SPHNAttributeDatatype
Description

SPHN datatype attribute defined by the dataset

has admission datetimedp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasAdmissionDateTime
Description

datetime the individual enters the healthcare provider institute, e.g. gets registered at the admission counter

Super-properties has datetimedp
Domain(s) Administrative Casec
Data type xsd:dateTimec

has alternate alleledp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasAlternateAllele
Description

the alternate nucleotide (A;T;C;G) of the concept

Super-properties SPHN attribute datatypedp
Domain(s) Single Nucleotide Variationc
Data type xsd:stringc

has assessment datetimedp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasAssessmentDateTime
Description

datetime at which the concept was assessed

Super-properties has datetimedp
Domain(s) TNM Classificationc Tumor Gradec Tumor Stagec Simple Scorec Oncology Treatment Assessmentc
Data type xsd:dateTimec

has biobank namedp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasBiobankName
Description

name of the biobank where the sample is stored

Super-properties has namedp
Domain(s) Biobanksamplec
Data type xsd:stringc

has coding datetimedp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasCodingDateTime
Description

datetime the concept was coded

Super-properties has datetimedp
Domain(s) Radiotherapy Procedurec FOPH Diagnosisc Diagnosisc Electrocardiographic Procedurec ICD-O Diagnosisc Procedurec Diagnostic Radiologic Examinationc FOPH Procedurec Nursing Diagnosisc
Data type xsd:dateTimec

has coding system and versiondp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasCodingSystemAndVersion
Description

name and version of the coding system

Super-properties SPHN attribute datatypedp
Domain(s) Codec Variant Notationc
Data type xsd:stringc

has collection datetimedp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasCollectionDateTime
Description

datetime of collection of the concept

Super-properties has datetimedp
Domain(s) Samplec Tumor Specimenc
Data type xsd:dateTimec

has commentdp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasComment
Description

comment or remark to the concept

Super-properties SPHN attribute datatypedp
Domain(s) Lab Resultc
Data type xsd:stringc

has datetimedp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasDateTime
Description

datetime of the concept

Super-properties SPHN attribute datatypedp
Domain(s) Consentc
Data type xsd:dateTimec

has daydp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasDay
Description

day of the concept

Super-properties SPHN attribute datatypedp
Domain(s) Birth Datec Death Datec
Data type xsd:gDayc

has determination datetimedp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasDeterminationDateTime
Description

datetime of determination of the concept

Super-properties has datetimedp
Domain(s) Cardiac Indexc Body Mass Indexc Respiratory Ratec Agec Body Surface Areac
Data type xsd:dateTimec

has discharge datetimedp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasDischargeDateTime
Description

datetime the individual leaves the healthcare provider institute

Super-properties has datetimedp
Domain(s) Administrative Casec
Data type xsd:dateTimec

has enddp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasEnd
Description

end of the concept

Super-properties SPHN attribute datatypedp
Domain(s) Genomic Positionc
Data type xsd:doublec

has end datetimedp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasEndDateTime
Description

datetime at which the concept ended

Super-properties has datetimedp
Domain(s) Drug Administration Eventc Electrocardiographic Procedurec Body Positionc Procedurec Diagnostic Radiologic Examinationc FOPH Procedurec Healthcare Encounterc Access Device Presencec Radiotherapy Procedurec
Data type xsd:dateTimec

has event datetimedp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasEventDateTime
Description

datetime of the event

Super-properties has datetimedp
Domain(s) Civil Statusc
Data type xsd:dateTimec

has exactdp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasExact
Description

detailed description of the concept

Super-properties SPHN attribute datatypedp
Domain(s) Locationc
Data type xsd:stringc

has exposure datetimedp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasExposureDateTime
Description

datetime of exposure

Super-properties has datetimedp
Domain(s) Allergy Episodec
Data type xsd:dateTimec

has extraction datetimedp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasExtractionDateTime
Description

date of the extraction of the data

Super-properties has datetimedp
Domain(s) Data Releasec
Data type xsd:dateTimec

has first administration datetimedp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasFirstAdministrationDateTime
Description

datetime of first administration

Super-properties has datetimedp
Domain(s) Drug Prescriptionc
Data type xsd:dateTimec

has first record datetimedp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasFirstRecordDateTime
Description

datetime the concept was first recorded

Super-properties has record datetimedp
Domain(s) Allergyc
Data type xsd:dateTimec

has free textdp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasFreeText
Description

free text related to the concept

Super-properties SPHN attribute datatypedp
Domain(s) Problem Conditionc
Data type xsd:stringc

has generic namedp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasGenericName
Description

generic name of the concept

Super-properties has namedp
Domain(s) Substancec
Data type xsd:stringc

has identifierdp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasIdentifier
Description

unique identifier identifying the concept

Super-properties SPHN attribute datatypedp
Domain(s) Healthcare Encounterc Samplec Tumor Specimenc Biobanksamplec Subject Pseudo Identifierc Codec Administrative Casec
Data type xsd:stringc

has interventiondp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasIntervention
Description

intervention suspected to be the cause of the concept, e.g. drug

Super-properties SPHN attribute datatypedp
Domain(s) Adverse Eventc
Data type xsd:stringc

has last administration datetimedp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasLastAdministrationDateTime
Description

datetime of last administration

Super-properties has datetimedp
Domain(s) Drug Prescriptionc
Data type xsd:dateTimec

has last reaction datetimedp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasLastReactionDateTime
Description

datetime of the last reaction

Super-properties has datetimedp
Domain(s) Allergyc
Data type xsd:dateTimec

has M prefixdp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasMPrefix
Description

prefix associated to the metastasis (M), as defined in the TNM coding system, e.g. c

Super-properties SPHN attribute datatypedp
Domain(s) TNM Classificationc
Data type xsd:stringc

has M suffixdp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasMSuffix
Description

suffix associated to the metastasis (M), as defined in the TNM coding system, e.g. 1b

Super-properties SPHN attribute datatypedp
Domain(s) TNM Classificationc
Data type xsd:stringc

has manifestation datetimedp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasManifestationDateTime
Description

datetime when manifestation showed

Super-properties has datetimedp
Domain(s) Allergy Episodec
Data type xsd:dateTimec

has measurement datetimedp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasMeasurementDateTime
Description

datetime of measurement

Super-properties has datetimedp
Domain(s) Body Weightc Body Heightc Circumference Measurec Cardiac Outputc Heart Ratec Oxygen Saturationc Inhaled Oxygen Concentrationc Blood Pressurec Measurementc Body Temperaturec
Data type xsd:dateTimec

has monthdp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasMonth
Description

month of the concept

Super-properties SPHN attribute datatypedp
Domain(s) Birth Datec Death Datec
Data type xsd:gMonthc

has N prefixdp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasNPrefix
Description

prefix associated to the nearby tissues (N), as defined in the TNM coding system, e.g. c

Super-properties SPHN attribute datatypedp
Domain(s) TNM Classificationc
Data type xsd:stringc

has N suffixdp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasNSuffix
Description

suffix associated to the nearby tissues (N), as defined in the TNM coding system, e.g. x

Super-properties SPHN attribute datatypedp
Domain(s) TNM Classificationc
Data type xsd:stringc

has namedp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasName
Description

name associated to the concept

Super-properties SPHN attribute datatypedp
Domain(s) Codec Data Filec
Data type xsd:stringc

has onset datetimedp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasOnsetDateTime
Description

datetime the concept first occurred or was observed

Super-properties has datetimedp
Domain(s) Adverse Eventc Problem Conditionc
Data type xsd:dateTimec

has qualitative resultdp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasQualitativeResult
Description

qualitative results of the concept

Super-properties SPHN attribute datatypedp
Domain(s) Lab Resultc
Data type xsd:stringc

has record datetimedp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasRecordDateTime
Description

datetime the concept was recorded

Super-properties has datetimedp
Domain(s) Diagnosisc ICD-O Diagnosisc Nursing Diagnosisc Administrative Genderc FOPH Diagnosisc Problem Conditionc
Data type xsd:dateTimec

has reference alleledp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasReferenceAllele
Description

the reference nucleotide (A;T;C;G) of the concept

Super-properties SPHN attribute datatypedp
Domain(s) Single Nucleotide Variationc
Data type xsd:stringc

has report datetimedp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasReportDateTime
Description

datetime the concept was reported

Super-properties has datetimedp
Domain(s) Lab Resultc
Data type xsd:dateTimec

has scoring systemdp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasScoringSystem
Description

name and version of the scoring system, e.g. Glasgow Coma Scale, geriatric depression scale-15

Super-properties SPHN attribute datatypedp
Domain(s) Simple Scorec
Data type xsd:stringc

has startdp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasStart
Description

start of the concept

Super-properties SPHN attribute datatypedp
Domain(s) Genomic Positionc
Data type xsd:doublec

has start datetimedp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasStartDateTime
Description

datetime at which the concept started

Super-properties has datetimedp
Domain(s) Diagnostic Radiologic Examinationc Drug Administration Eventc Radiotherapy Procedurec Body Positionc Procedurec Electrocardiographic Procedurec FOPH Procedurec Healthcare Encounterc Access Device Presencec
Data type xsd:dateTimec

has T prefixdp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasTPrefix
Description

prefix associated to the primary tumor (T), as defined in the TNM coding system, e.g. c

Super-properties SPHN attribute datatypedp
Domain(s) TNM Classificationc
Data type xsd:stringc

has T suffixdp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasTSuffix
Description

suffix associated to the primary tumor (T), as defined in the TNM coding system, e.g. 1a

Super-properties SPHN attribute datatypedp
Domain(s) TNM Classificationc
Data type xsd:stringc

has template identifierdp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasTemplateIdentifier
Description

unique identifier identifying the template of the concept

Super-properties has identifierdp
Domain(s) Consentc
Data type xsd:stringc

has timedp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasTime
Description

time of the concept

Super-properties SPHN attribute datatypedp
Domain(s) Death Datec Birth Datec
Data type xsd:timec

has uniform resource identifierdp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasUniformResourceIdentifier
Description

unique identifier of the concept that allows the system to identify all the information needed to access the resource

Super-properties has identifierdp
Domain(s) Data Filec
Data type xsd:stringc

has valuedp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasValue
Description

value of the concept

Super-properties SPHN attribute datatypedp
Domain(s) Variant Notationc Simple Scorec TNM Classificationc Quantityc
Data type xsd:doublec xsd:stringc

has versiondp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasVersion
Description

version of the concept value or code

Super-properties SPHN attribute datatypedp
Domain(s) TNM Classificationc
Data type xsd:stringc

has yeardp # DPs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#hasYear
Description

year of the concept

Super-properties SPHN attribute datatypedp
Domain(s) Death Datec Birth Datec
Data type xsd:gYearc

Annotation Properties

descriptionap # APs

URI http://purl.org/dc/elements/1.1/description

titleap # APs

URI http://purl.org/dc/elements/1.1/title

licenseap # APs

URI http://purl.org/dc/terms/license

deprecatedap # APs

URI http://www.w3.org/2002/07/owl#deprecated

maxCardinalityap # APs

URI http://www.w3.org/2002/07/owl#maxCardinality

minCardinalityap # APs

URI http://www.w3.org/2002/07/owl#minCardinality

noteap # APs

URI http://www.w3.org/2004/02/skos/core#note

replacesap # APs

URI https://biomedit.ch/rdf/sphn-ontology/sphn#replaces
Description

Property that links the new version of an SPHN class replacing an SPHN old class

Named Individuals

Acid citrate dextroseni

Class(es)
Tumor Specimen primary container
Sample primary container
URI https://biomedit.ch/rdf/sphn-ontology/sphn#AcidCitrateDextrose

Addiction medicineni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#AddictionMedicine

Alcohol basedni

Class(es)
Sample fixation type
Tumor Specimen fixation type
URI https://biomedit.ch/rdf/sphn-ontology/sphn#AlcoholBased

Aldehyde basedni

Class(es)
Sample fixation type
Tumor Specimen fixation type
URI https://biomedit.ch/rdf/sphn-ontology/sphn#AldehydeBased

Aldehyde-based stabilizer for CTCsni

Class(es)
Tumor Specimen primary container
Sample primary container
URI https://biomedit.ch/rdf/sphn-ontology/sphn#AldehydeBasedStabilizerForCTCs

Allergology and clinical immunologyni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#AllergologyAndClinicalImmunology

Allprotect ® tissue reagentni

Class(es)
Sample fixation type
Tumor Specimen fixation type
URI https://biomedit.ch/rdf/sphn-ontology/sphn#AllprotectTissueReagent

Anaesthesiologyni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Anaesthesiology

Angiologyni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Angiology

biochemicalni

Class(es)
Oncology Treatment Assessment progression type
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Biochemical

CTni

Class(es)
Diagnostic Radiologic Examination method
URI https://biomedit.ch/rdf/sphn-ontology/sphn#CT

Cardiac and thoracic vascular surgeryni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#CardiacAndThoracicVascularSurgery

Cardiologyni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Cardiology

Cell Preparation Tube® citrateni

Class(es)
Tumor Specimen primary container
Sample primary container
URI https://biomedit.ch/rdf/sphn-ontology/sphn#CellPreparationTubeCitrate

Cell Preparation Tube® heparinni

Class(es)
Tumor Specimen primary container
Sample primary container
URI https://biomedit.ch/rdf/sphn-ontology/sphn#CellPreparationTubeHeparin

Chemical additives / stabilizersni

Class(es)
Tumor Specimen primary container
Sample primary container
URI https://biomedit.ch/rdf/sphn-ontology/sphn#ChemicalAdditivesStabilizers

Child and adolescent psychiatry and psychotherapyni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#ChildAndAdolescentPsychiatryAndPsychotherapy

Child and adolescent psychologyni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#ChildAndAdolescentPsychology

Chiropractic specialistni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#ChiropracticSpecialist

Citrate phosphate dextroseni

Class(es)
Tumor Specimen primary container
Sample primary container
URI https://biomedit.ch/rdf/sphn-ontology/sphn#CitratePhosphateDextrose

Clinical pharmacology and toxicologyni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#ClinicalPharmacologyAndToxicology

Clinical Psychologyni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#ClinicalPsychology

Community pharmacyni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#CommunityPharmacy

complementaryni

Class(es)
FOPH Diagnosis rank
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Complementary

complete responseni

Class(es)
Oncology Treatment Assessment result
URI https://biomedit.ch/rdf/sphn-ontology/sphn#CompleteResponse

Congenital abnormalityni

Class(es)
Adverse Event consequences
URI https://biomedit.ch/rdf/sphn-ontology/sphn#CongenitalAbnormality

Deathni

Class(es)
Adverse Event consequences
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Death

Dermatology and venereologyni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#DermatologyAndVenereology

du boisni

Class(es)
Body Surface Area calculation method
URI https://biomedit.ch/rdf/sphn-ontology/sphn#DuBois

EDTA and gelni

Class(es)
Tumor Specimen primary container
Sample primary container
URI https://biomedit.ch/rdf/sphn-ontology/sphn#EDTAAndGel

Endocrinology and Diabetologyni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#EndocrinologyAndDiabetology

Fatalni

Class(es)
Adverse Event outcome
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Fatal

Forensic medicineni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#ForensicMedicine

Gastroenterologyni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Gastroenterology

General internal medicineni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#GeneralInternalMedicine

General medical practitionerni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#GeneralMedicalPractitioner

General medicineni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#GeneralMedicine

Geriatric medicineni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#GeriatricMedicine

Glassni

Class(es)
Tumor Specimen primary container
Sample primary container
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Glass

>ni

Class(es)
Comparator
URI https://biomedit.ch/rdf/sphn-ontology/sphn#GreaterThan

>=ni

Class(es)
Comparator
URI https://biomedit.ch/rdf/sphn-ontology/sphn#GreaterThanOrEqual

Gynaecology and obstetricsni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#GynaecologyAndObstetrics

Haematologyni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Haematology

Hand surgeryni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#HandSurgery

Health Psychologyni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#HealthPsychology

Heat stabilizationni

Class(es)
Sample fixation type
Tumor Specimen fixation type
URI https://biomedit.ch/rdf/sphn-ontology/sphn#HeatStabilization

Hirudinni

Class(es)
Tumor Specimen primary container
Sample primary container
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Hirudin

Hospital pharmacyni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#HospitalPharmacy

Hospitalisation or prolongationni

Class(es)
Adverse Event consequences
URI https://biomedit.ch/rdf/sphn-ontology/sphn#HospitalisationOrProlongation

Infectologyni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Infectology

Intensive care medicineni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#IntensiveCareMedicine

Inter-residue coordinatesni

Class(es)
Genomic Position coordinate convention
URI https://biomedit.ch/rdf/sphn-ontology/sphn#InterResidueCoordinates

Internal medicineni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#InternalMedicine

<ni

Class(es)
Comparator
URI https://biomedit.ch/rdf/sphn-ontology/sphn#LessThan

<=ni

Class(es)
Comparator
URI https://biomedit.ch/rdf/sphn-ontology/sphn#LessThanOrEqual

Life-threateningni

Class(es)
Adverse Event consequences
URI https://biomedit.ch/rdf/sphn-ontology/sphn#LifeThreatening

Lithium heparinni

Class(es)
Tumor Specimen primary container
Sample primary container
URI https://biomedit.ch/rdf/sphn-ontology/sphn#LithiumHeparin

Lithium heparin and gelni

Class(es)
Tumor Specimen primary container
Sample primary container
URI https://biomedit.ch/rdf/sphn-ontology/sphn#LithiumHeparinAndGel

Lithium heparin and rubber plugni

Class(es)
Tumor Specimen primary container
Sample primary container
URI https://biomedit.ch/rdf/sphn-ontology/sphn#LithiumHeparinAndRubberPlug

localizedni

Class(es)
Oncology Treatment Assessment progression type
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Localized

MRIni

Class(es)
Diagnostic Radiologic Examination method
URI https://biomedit.ch/rdf/sphn-ontology/sphn#MRI

Medical geneticsni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#MedicalGenetics

Medical oncologyni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#MedicalOncology

metastaticni

Class(es)
Oncology Treatment Assessment progression type
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Metastatic

mostellerni

Class(es)
Body Surface Area calculation method
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Mosteller

Nephrologyni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Nephrology

Neurologyni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Neurology

Neuropsychologyni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Neuropsychology

Neurosurgeryni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Neurosurgery

Neutral buffered formalinni

Class(es)
Sample fixation type
Tumor Specimen fixation type
URI https://biomedit.ch/rdf/sphn-ontology/sphn#NeutralBufferedFormalin

Non-aldehyde-based stabilizer for cell-free nucleic acidsni

Class(es)
Tumor Specimen primary container
Sample primary container
URI https://biomedit.ch/rdf/sphn-ontology/sphn#NonAldehydeBasedStabilizerForCellFreeNucleicAcids

Nonaldehyde based without acetic acidni

Class(es)
Sample fixation type
Tumor Specimen fixation type
URI https://biomedit.ch/rdf/sphn-ontology/sphn#NonaldehydeBasedWithoutAceticAcid

Nonaldehyde with acetic acidni

Class(es)
Sample fixation type
Tumor Specimen fixation type
URI https://biomedit.ch/rdf/sphn-ontology/sphn#NonaldehydeWithAceticAcid

Nonbuffered formalinni

Class(es)
Sample fixation type
Tumor Specimen fixation type
URI https://biomedit.ch/rdf/sphn-ontology/sphn#NonbufferedFormalin

None of the consequences mentionedni

Class(es)
Adverse Event consequences
URI https://biomedit.ch/rdf/sphn-ontology/sphn#NoneOfTheConsequencesMentioned

Not recoveredni

Class(es)
Adverse Event outcome
URI https://biomedit.ch/rdf/sphn-ontology/sphn#NotRecovered

Nuclear medicineni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#NuclearMedicine

Occupational medicineni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#OccupationalMedicine

Ophthalmologyni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Ophthalmology

Optimum cutting temperature mediumni

Class(es)
Tumor Specimen fixation type
Sample fixation type
URI https://biomedit.ch/rdf/sphn-ontology/sphn#OptimumCuttingTemperatureMedium

Oragene collection container or equivalentni

Class(es)
Tumor Specimen primary container
Sample primary container
URI https://biomedit.ch/rdf/sphn-ontology/sphn#OrageneCollectionContainerOrEquivalent

Oral and maxillofacial surgeryni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#OralAndMaxillofacialSurgery

Oral surgeryni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#OralSurgery

Orthodonticsni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Orthodontics

Orthopaedic surgery and traumatology of the locomotor apparatusni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#OrthopaedicSurgeryAndTraumatologyOfTheLocomotorApparatus

otherni

Class(es)
Tumor Specimen primary container
Tumor Specimen fixation type
Body Surface Area calculation method
Sample fixation type
Therapeutic Area specialty name
Sample primary container
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Other

Otorhinolaryngologyni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Otorhinolaryngology

PAXgene® blood DNAni

Class(es)
Tumor Specimen primary container
Sample primary container
URI https://biomedit.ch/rdf/sphn-ontology/sphn#PAXgeneBloodDNA

PAXgene® blood RNA+ni

Class(es)
Tumor Specimen primary container
Sample primary container
URI https://biomedit.ch/rdf/sphn-ontology/sphn#PAXgeneBloodRNAplus

PAXgene® bone marrow RNAni

Class(es)
Tumor Specimen primary container
Sample primary container
URI https://biomedit.ch/rdf/sphn-ontology/sphn#PAXgeneBoneMarrowRNA

PAXgene tissueni

Class(es)
Sample fixation type
Tumor Specimen fixation type
URI https://biomedit.ch/rdf/sphn-ontology/sphn#PAXgeneTissue

PETni

Class(es)
Diagnostic Radiologic Examination method
URI https://biomedit.ch/rdf/sphn-ontology/sphn#PET

PET CTni

Class(es)
Diagnostic Radiologic Examination method
URI https://biomedit.ch/rdf/sphn-ontology/sphn#PETCT

Paediatric surgeryni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#PaediatricSurgery

Paediatricsni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Paediatrics

partial responseni

Class(es)
Oncology Treatment Assessment result
URI https://biomedit.ch/rdf/sphn-ontology/sphn#PartialResponse

Pathologyni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Pathology

Periodonticsni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Periodontics

Permanent damage or disabilityni

Class(es)
Adverse Event consequences
URI https://biomedit.ch/rdf/sphn-ontology/sphn#PermanentDamageOrDisability

Pharmaceutical medicineni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#PharmaceuticalMedicine

Physical filtration systemni

Class(es)
Tumor Specimen primary container
Sample primary container
URI https://biomedit.ch/rdf/sphn-ontology/sphn#PhysicalFiltrationSystem

Physical medicine and rehabilitationni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#PhysicalMedicineAndRehabilitation

Plastic, reconstructive and aesthetic surgeryni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#PlasticReconstructiveAndAestheticSurgery

Pneumologyni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Pneumology

Polyethylene tube sterileni

Class(es)
Tumor Specimen primary container
Sample primary container
URI https://biomedit.ch/rdf/sphn-ontology/sphn#PolyethyleneTubeSterile

Polypropylene tube sterileni

Class(es)
Tumor Specimen primary container
Sample primary container
URI https://biomedit.ch/rdf/sphn-ontology/sphn#PolypropyleneTubeSterile

Potassium EDTAni

Class(es)
Tumor Specimen primary container
Sample primary container
URI https://biomedit.ch/rdf/sphn-ontology/sphn#PotassiumEDTA

Prevention and public healthni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#PreventionAndPublicHealth

principalni

Class(es)
FOPH Procedure rank
FOPH Diagnosis rank
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Principal

progressive diseaseni

Class(es)
Oncology Treatment Assessment result
URI https://biomedit.ch/rdf/sphn-ontology/sphn#ProgressiveDisease

Protease inhibitorsni

Class(es)
Tumor Specimen primary container
Sample primary container
URI https://biomedit.ch/rdf/sphn-ontology/sphn#ProteaseInhibitors

Psychiatry and psychotherapyni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#PsychiatryAndPsychotherapy

Psychotherapyni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Psychotherapy

RECIST 1.0ni

Class(es)
Oncology Treatment Assessment criteria
URI https://biomedit.ch/rdf/sphn-ontology/sphn#RECIST1dot0

RECIST 1.1ni

Class(es)
Oncology Treatment Assessment criteria
URI https://biomedit.ch/rdf/sphn-ontology/sphn#RECIST1dot1

RNA Laterni

Class(es)
Tumor Specimen primary container
Tumor Specimen fixation type
Sample fixation type
Sample primary container
URI https://biomedit.ch/rdf/sphn-ontology/sphn#RNALater

Radio-oncology and radiotherapyni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#RadioOncologyAndRadiotherapy

Radiologyni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Radiology

Reconstructive dentistryni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#ReconstructiveDentistry

Recoveredni

Class(es)
Adverse Event outcome
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Recovered

Recoveringni

Class(es)
Adverse Event outcome
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Recovering

Recovering with sequelaeni

Class(es)
Adverse Event outcome
URI https://biomedit.ch/rdf/sphn-ontology/sphn#RecoveringWithSequelae

regionalni

Class(es)
Oncology Treatment Assessment progression type
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Regional

Residue coordinatesni

Class(es)
Genomic Position coordinate convention
URI https://biomedit.ch/rdf/sphn-ontology/sphn#ResidueCoordinates

Rheumatologyni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Rheumatology

S8820 protease inhibitor tablets or equivalentni

Class(es)
Tumor Specimen primary container
Sample primary container
URI https://biomedit.ch/rdf/sphn-ontology/sphn#S8820ProteaseInhibitorTabletsOrEquivalent

SPECTni

Class(es)
Diagnostic Radiologic Examination method
URI https://biomedit.ch/rdf/sphn-ontology/sphn#SPECT

secondaryni

Class(es)
FOPH Diagnosis rank
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Secondary

Serum separator tube with clot activatorni

Class(es)
Tumor Specimen primary container
Sample primary container
URI https://biomedit.ch/rdf/sphn-ontology/sphn#SerumSeparatorTubeWithClotActivator

Serum tube without clot activatorni

Class(es)
Tumor Specimen primary container
Sample primary container
URI https://biomedit.ch/rdf/sphn-ontology/sphn#SerumTubeWithoutClotActivator

Snap freezingni

Class(es)
Sample fixation type
Tumor Specimen fixation type
URI https://biomedit.ch/rdf/sphn-ontology/sphn#SnapFreezing

Sodium citrateni

Class(es)
Tumor Specimen primary container
Sample primary container
URI https://biomedit.ch/rdf/sphn-ontology/sphn#SodiumCitrate

Sodium EDTAni

Class(es)
Tumor Specimen primary container
Sample primary container
URI https://biomedit.ch/rdf/sphn-ontology/sphn#SodiumEDTA

Sodium fluoride/potassium oxalateni

Class(es)
Tumor Specimen primary container
Sample primary container
URI https://biomedit.ch/rdf/sphn-ontology/sphn#SodiumFluoridePotassiumOxalate

Sodium heparinni

Class(es)
Tumor Specimen primary container
Sample primary container
URI https://biomedit.ch/rdf/sphn-ontology/sphn#SodiumHeparin

stable diseaseni

Class(es)
Oncology Treatment Assessment result
URI https://biomedit.ch/rdf/sphn-ontology/sphn#StableDisease

Stool collection container with DNA stabilizerni

Class(es)
Tumor Specimen primary container
Sample primary container
URI https://biomedit.ch/rdf/sphn-ontology/sphn#StoolCollectionContainerWithDNAStabilizer

supplementaryni

Class(es)
FOPH Procedure rank
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Supplementary

Surgeryni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Surgery

Temporarily serious impact / medically importantni

Class(es)
Adverse Event consequences
URI https://biomedit.ch/rdf/sphn-ontology/sphn#TemporarilySeriousImpactMedicallyImportant

Tempus® tubeni

Class(es)
Tumor Specimen primary container
Sample primary container
URI https://biomedit.ch/rdf/sphn-ontology/sphn#TempusTube

Thoracic surgeryni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#ThoracicSurgery

Trace elements tubeni

Class(es)
Tumor Specimen primary container
Sample primary container
URI https://biomedit.ch/rdf/sphn-ontology/sphn#TraceElementsTube

traceable author statementni

Class(es)
Oncology Treatment Assessment criteria
URI https://biomedit.ch/rdf/sphn-ontology/sphn#TraceableAuthorStatement

Tropical and travel medicineni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#TropicalAndTravelMedicine

Urologyni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#Urology

Vacuum technology stabilizationni

Class(es)
Sample fixation type
Tumor Specimen fixation type
URI https://biomedit.ch/rdf/sphn-ontology/sphn#VacuumTechnologyStabilization

Vascular surgeryni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#VascularSurgery

Visceral medicineni

Class(es)
Therapeutic Area specialty name
URI https://biomedit.ch/rdf/sphn-ontology/sphn#VisceralMedicine

X-rayni

Class(es)
Diagnostic Radiologic Examination method
URI https://biomedit.ch/rdf/sphn-ontology/sphn#X-ray

Namespaces

default (:)
https://biomedit.ch/rdf/sphn-ontology/sphn
cdao
http://purl.obolibrary.org/obo/
chop
https://biomedit.ch/rdf/sphn-resource/chop/
dc
http://purl.org/dc/elements/1.1/
dcterms
http://purl.org/dc/terms/
geno
http://purl.obolibrary.org/obo/GENO_
icd-10-gm
https://biomedit.ch/rdf/sphn-resource/icd-10-gm/
loinc
https://loinc.org/rdf/
owl
http://www.w3.org/2002/07/owl#
prov
http://www.w3.org/ns/prov#
rdf
http://www.w3.org/1999/02/22-rdf-syntax-ns#
rdfs
http://www.w3.org/2000/01/rdf-schema#
sdo
https://schema.org/
skos
http://www.w3.org/2004/02/skos/core#
snomed
http://snomed.info/id/
so
http://purl.obolibrary.org/obo/SO_
sphn-atc
https://biomedit.ch/rdf/sphn-resource/atc/
sphn-geno
https://biomedit.ch/rdf/sphn-resource/geno/
sphn-hgnc
https://biomedit.ch/rdf/sphn-resource/hgnc/
sphn-loinc
https://biomedit.ch/rdf/sphn-resource/loinc/
sphn-so
https://biomedit.ch/rdf/sphn-resource/so/
ucum
https://biomedit.ch/rdf/sphn-resource/ucum/
xsd
http://www.w3.org/2001/XMLSchema#

Legend

cClasses
opObject Properties
fpFunctional Properties
dpData Properties
apAnnotation Properties
pProperties
niNamed Individuals